Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0415 |
Symbol | |
ID | 3932856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 418443 |
End bp | 419021 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637902760 |
Product | hypothetical protein |
Protein accession | YP_508357 |
Protein GI | 89052906 |
COG category | [S] Function unknown |
COG ID | [COG3786] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.659798 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAAGGC GATCCCCGAA GCCGCCACCA ACACGGATCT GCACGTCGTT GAAGGCGTGT AGCAGCGGCA TGTCCCCGGA AGATTTGGTC CTGACACCCT CTGGTTTACG GTTTTGGGGC GCGCGCCTGC CCTTCACGGT GGGGCGCGGC GGTGTCGTGC GCGACAAACG GGAAGGCGAT GGCGGCACGC CCGTGGGAAC GCACCGGATC GTTGGGTGCC TCTACCGCGC GGACCGGGGA CCCAAACCCT GCGATTGGGC GGTGCCGATC GGCCCCAACG ACCTTTGGTC AGATGATGAG GCGTCGGACG ATTACAATCT GATGGTGCGC AGGCCCTACA TGGGAACCGC CGAGCGGCTG GCCCGTGGCG ATCCGCTTTA TGACATTGTG TTGATCACCG ATTGGAACTG GCCCGAGGCG CAACCTGGCC GGGGGTCTGC CATCTTCATC CACCAATGGC GTGGACCCGG GCGCTCTACC GAGGGCTGCG TGGCCGTCAG CCGGCGTCAT TTGCGCTGGA TCGTACCGCG AATCAACCAT GGCACGCGGT TGATCGTTCC CGACACATTG GCGAGGTGA
|
Protein sequence | MRRRSPKPPP TRICTSLKAC SSGMSPEDLV LTPSGLRFWG ARLPFTVGRG GVVRDKREGD GGTPVGTHRI VGCLYRADRG PKPCDWAVPI GPNDLWSDDE ASDDYNLMVR RPYMGTAERL ARGDPLYDIV LITDWNWPEA QPGRGSAIFI HQWRGPGRST EGCVAVSRRH LRWIVPRINH GTRLIVPDTL AR
|
| |