Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0393 |
Symbol | |
ID | 3932834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 396206 |
End bp | 396841 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637902738 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_508335 |
Protein GI | 89052884 |
COG category | [R] General function prediction only |
COG ID | [COG2910] Putative NADH-flavin reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.682232 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTT CGGTGATCGG TGCAAGCCGC GGCATTGGCC GCAAAGTGGT GGAAGAGGCT CTGGAACGCG GCCATAGCGT GACTGGCATG GCGCGGTCCG CCACATCGCT TGGAATAGAC CATGCGGAGT TCACCGCAAT CGACGGGGAT GCCACCAACG CGACCGATGT GACGCAAGCC ATCGACGGCG CGGACGCGGT GATCCTGACC CTCGGCGTGC CGAAAGATGC GCGGGTCCTG AAGTCCACGA CGCTATTCTC GGATGCCACA AGAACCTTGA TCACCGCGAT GGAAGAGGCG GGGATAAAAC GCCTGCTCAC CGTCACAGGC TTTGGCGCGG GCGACAGCAA AGAGAAACTC TCCACGCCGG AGCGTCTGAC CCAAAAAGCG TTCCTGGGCC GCGCCTATGC CGACAAGGAC CTGCAAGAAA AGTTGATCCG CGACAGCGAT CTGGACTGGA CCATCGCCCG CCCCGGCATC CTGTCGGACA ACCGTAAAAG CAACGCCTAT AAGGTGCTGG TCGAGAAAGA GACCTGGCGC AACGGGTTGA TCAACCGCTC AGACGTGGCA GACTTTTTGG TCACCGCTGC AGAGGACGAG AGCCACATCC ACAAAACCCC TGCCCTTCAA CGCTGA
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Protein sequence | MKISVIGASR GIGRKVVEEA LERGHSVTGM ARSATSLGID HAEFTAIDGD ATNATDVTQA IDGADAVILT LGVPKDARVL KSTTLFSDAT RTLITAMEEA GIKRLLTVTG FGAGDSKEKL STPERLTQKA FLGRAYADKD LQEKLIRDSD LDWTIARPGI LSDNRKSNAY KVLVEKETWR NGLINRSDVA DFLVTAAEDE SHIHKTPALQ R
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