| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0377 |
|---|
| Symbol | |
|---|
| ID | 3932818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 383203 |
|---|
| End bp | 383664 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637902722 |
|---|
| Product | Iojap-related protein |
|---|
| Protein accession | YP_508319 |
|---|
| Protein GI | 89052868 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0799] Uncharacterized homolog of plant Iojap protein |
|---|
| TIGRFAM ID | [TIGR00090] iojap-like ribosome-associated protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGATA GAGTCCTGAC CGGACTTAAC CAAGCAGAGG CCAAGACCTC TGCCACTGCG
GCGACAGCCC AAGACCGGGG CGCGCGCACC CAAACCGCGT ATAGCAGCGA AGAGTTGCTT
GAGCGCATTC TGACTTCCCT GACTGACGAC AAAGCCGAAG ACGTCGTGCA GATTGATCTG
CGCGGAAAGT CCTCGATTGG CGATTACATG GTCGTGGCTT CTGGCCGGTC GACCCGTCAA
GTGTCCGCCA TGGCAGAGAA GCTGGTCGAC AAATTGAAGA CCGACTTCGG CTTATATTCC
AAGATCGAAG GCAAGGATTC CGGCGATTGG GTGCTGATCG ACACGGCAGA TGTCATCGTC
CATATTTTCC GGCCTGAGGT GCGAGAATTC TATCAGCTGG AGAAGATGTG GCAGCCAGAG
GCGCCTGAGA CGACCCCGGG CCCCGGGGCC GCGGCGCCCT GA
|
|---|
| Protein sequence | MEDRVLTGLN QAEAKTSATA ATAQDRGART QTAYSSEELL ERILTSLTDD KAEDVVQIDL
RGKSSIGDYM VVASGRSTRQ VSAMAEKLVD KLKTDFGLYS KIEGKDSGDW VLIDTADVIV
HIFRPEVREF YQLEKMWQPE APETTPGPGA AAP
|
|---|
| |