| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0354 |
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| Symbol | |
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| ID | 3932795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 357639 |
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| End bp | 358805 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637902699 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_508296 |
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| Protein GI | 89052845 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAAA TTCCGACCCA TGCCCCCGTC GATCCGGTGG CCCTCACGGC CGATCTGATC
CGCTGCAACT CGGTCACGCC GCTGGAAGGC GGGGCGCTGG TGTTGCTGGA GGCGCTGTTG
TCCGATGCCG GGTTTGACTG CACGCGGGTG GATCGGGGCG GTATCGCGAA CCTCTATGCG
CGTTGGGGCA CGCGCGGCAA CGGCAAGGCG TTTGGCTTCA ACGGCCACAC CGATGTGGTG
CCCGTGGGGG ATGAAGCGGC CTGGACCCAC CCCCCGTTTG GCGCGGAGGT CGACGGCGAC
TGGATGTACG GGCGGGGCGC CACCGATATG AAATCGGGCG TCGCCGCTTT TGCCGCCGCC
GCCATCGACT TCGTGCGTGA CACACCTCCC GACGGGGCCA TCGTTCTGGC CATCACCGGC
GATGAGGAGG GCGAAAGCAC CGACGGCACC ATAGCGCTGC TGGACTGGAT GGAGGAGGTG
GGCGAGCGCA TCGACGTCTG CATCGTGGGA GAGCCGACCT GCCCCGAGCA GATGGGCGAC
ATGATGAAGA TCGGCCGCCG CGGCGCGCTG ACCGCGTTTT TTGAGGTCAT CGGCAAACAG
GGCCATTCCG CCTATCTTCA CAAGGTGATC AATCCGATGC CTGCCGTGGC GCTTCTGGGC
CATCGCCTGT CCACCCATAC GCTGGATGAG GGGACGGATC ATTTCGATCC CTCTACCTGC
GCCATCACCA CCATCGACAC AGGCAACCCC GCCAACAACG TGATCCCCGC AAAGACGCGC
ATGACGGTAA ACCTGCGGTT CAACGATCTG CATTCCGGCG ACAGCCTCAC CGCGTGGCTG
CGGGAGGAGG CCGACCGCGT CGCCGAGGAC ACCGGCACAA CGATCCGGAT GACCACCAAA
CTCAGCGGCG AGTCGTTCCT GACGCCCCCC GGTGACCTCT CCGATCTGGT GGGCAAAGCC
GTTCAGGCTG AAACGGGCCG CCAGCCCACC TTGTCGACCA CCGGCGGCAC ATCCGATGCG
CGCTTCGTGA AAAACCATTG CCCCGTCGTG GAATTCGGCC TCGTTGGCCA CCGCATGCAC
CAGGTCGATG AACGCGTGCG GATCAGCGAT ATCGAGGACC TGAAGAGGGT CTATGGACGC
GTGCTGACAG AGTACTTCGC GGGATAG
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| Protein sequence | MSQIPTHAPV DPVALTADLI RCNSVTPLEG GALVLLEALL SDAGFDCTRV DRGGIANLYA
RWGTRGNGKA FGFNGHTDVV PVGDEAAWTH PPFGAEVDGD WMYGRGATDM KSGVAAFAAA
AIDFVRDTPP DGAIVLAITG DEEGESTDGT IALLDWMEEV GERIDVCIVG EPTCPEQMGD
MMKIGRRGAL TAFFEVIGKQ GHSAYLHKVI NPMPAVALLG HRLSTHTLDE GTDHFDPSTC
AITTIDTGNP ANNVIPAKTR MTVNLRFNDL HSGDSLTAWL REEADRVAED TGTTIRMTTK
LSGESFLTPP GDLSDLVGKA VQAETGRQPT LSTTGGTSDA RFVKNHCPVV EFGLVGHRMH
QVDERVRISD IEDLKRVYGR VLTEYFAG
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