| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0353 |
|---|
| Symbol | |
|---|
| ID | 3932794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 355750 |
|---|
| End bp | 357342 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637902698 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_508295 |
|---|
| Protein GI | 89052844 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01445] intein N-terminal splicing region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTACAG GCAACGAGCT ACCCATCAAT GAAGGTGCGT CTGCACTTCA GATGGCGAAC
ACGATCTTTG GGCCCGGCGT CACGGTCAAT ACGGCGTCCT ATACCGGGTG GAGCCAGTCA
TCGGGCATCT ACACCAACGG CGACAGCGTG GCCCCCGGGG TCACGCCATC AGACACCGGT
GTGATCCTGT CAACGGGCCG CGCAAGCCAC ATCACCCAGT CAAACGGGGA TCCCAACCGG
TCCGACAGCA CATCCACCAA TACGCCCGGG CCGTCCAATG ACCCGGATTT CAACGCGATC
GCAGGCTTCG TCGGCAGCAA CGATGCCAGC TTTCTGGAGG TGAACTTCAC GCCAACGACC
GATGTCCTGA CGATGCAGTT CACCTTCGCG TCCGAAGAAT ATCCGGAATA TACCGGATCG
GTCTTCAACG ACATCTTCGG CGTCTGGGTG AACGGCGCGC TGGTCGCCTC GCCCGTGGTG
AACGTCACGC AAATCAACTC GGTCAACCAG TCCGAGAATG CCACGCTGTT CAACAACAAC
ACCGACGACG ATTACAACAC GGAGATGGAC GGCTTCACCG TGACGCTGAC ATTGGTGATG
CCGGTCAACA TCAACCAGCC CAACGACATC AAGATCGGCG TCGCCGACGT GGCGGACAGC
GCCTACGATT CCAATGTCCT GATTGCGGCA GGCTCAATCC AGGGCGAGTT CGTCGCGGAA
TCGGATTCGA TCACTCACCT GGAGGGGCTT ACATCCGTCC TGGATGTGCT GGCCAACGAC
CCGACCTCGG GCGGGATCGC CTTCATCACG CATATCAACG GGGTCGAGGT TAATCCCGGC
GACAGCGTGA CCCTGTCGGA CGGCACCATC GTCACACTGC TGCCATCGGG CGAACTGCAG
ATTGATCCCC CCGCCACGCA GACGGGGCTG ACGTCGAGCG AGACAATCCA CTTCACCTAC
ACCGTCGACA ATGGCAGCGG CATCACCGAC ACGGCCTTCG TGACGGTCAC GGCGATCCCG
TGTTTTGCCC GTGGCACCAT GATCCTGACG GCGCATGGTG AAAAACCGGT CGAAACTCTT
GTGCCCGGAG ACCGGATCGC AACCCGTGAC AATGGCTTGC AGGAGATCCG CTGGATCGGC
ACGCGCAAGG TCGCGGCAGA GGGGCGGTTT GCCCCCATCG CCATCGAGGC CGGAACCTTC
GGGATGCATC GCCGCCTTGT CGTTTCCCCA CAACATCGCG TGATGCTGAC CCATTGGATG
GCCGAGGTGA TGTTTGGCGA GGATGAGGTG CTGGTGGCCG CCAAGGATCT GGTCAACGAT
TGCTCCGTCC GCGTGTTGGG GCCGGGCGAC TTTGATGATG GCGAGGTGGA GTATTTCCAC
CTGCTGTTTG ACCAGCATCA GATCATCTTT TCAGACGGGC TGGCGACCGA GAGCTTTCTG
CCGGGACCCA CGGTGATGAA CGACCTCGAT GCCGCTGTGC AGGAGGAAGT TCTGGCGTTG
TTCCCGGATA TCGACCCTGA CACCAAGGAC GGTTATGGCC CTGCCGCCCG CCTGCCGCTG
CGTGCGTTTG AAGCGCGCGC GATGCTGGCC TGA
|
|---|
| Protein sequence | MPTGNELPIN EGASALQMAN TIFGPGVTVN TASYTGWSQS SGIYTNGDSV APGVTPSDTG
VILSTGRASH ITQSNGDPNR SDSTSTNTPG PSNDPDFNAI AGFVGSNDAS FLEVNFTPTT
DVLTMQFTFA SEEYPEYTGS VFNDIFGVWV NGALVASPVV NVTQINSVNQ SENATLFNNN
TDDDYNTEMD GFTVTLTLVM PVNINQPNDI KIGVADVADS AYDSNVLIAA GSIQGEFVAE
SDSITHLEGL TSVLDVLAND PTSGGIAFIT HINGVEVNPG DSVTLSDGTI VTLLPSGELQ
IDPPATQTGL TSSETIHFTY TVDNGSGITD TAFVTVTAIP CFARGTMILT AHGEKPVETL
VPGDRIATRD NGLQEIRWIG TRKVAAEGRF APIAIEAGTF GMHRRLVVSP QHRVMLTHWM
AEVMFGEDEV LVAAKDLVND CSVRVLGPGD FDDGEVEYFH LLFDQHQIIF SDGLATESFL
PGPTVMNDLD AAVQEEVLAL FPDIDPDTKD GYGPAARLPL RAFEARAMLA
|
|---|
| |