| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0349 |
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| Symbol | dapD |
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| ID | 3932790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 353095 |
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| End bp | 353922 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637902694 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_508291 |
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| Protein GI | 89052840 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.578852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAACG CTCAGCTAGA GACCGCTATC GAGGCCGCAT GGGAGGCCCG TGATACGATC
ACCCCCGCCA CCATGGGCGA GACCCGTGAA GCGATTGAAG ATACGCTGGC CGCTTTGGAC
GGCGGCACGC TGCGTGTGGC CGAGAAGCAG GACAGCGGCG ACTGGCATGT GAACCAATGG
GCCAAGAAGG CGGTGCTTCT GGGCTTCCGC CTGAAAGATA TGGAGATGCA GGGCGGCTCC
GCGCAGGGCG GCAGCTGGTG GGACAAGGTC GACAGCAAAT GGGCCACCTG GGGCGATAAT
GAGTGGGGCG CCGCAGGCTT CCGTGCCGTG CCCAACTGCG TCGTGCGCAA GTCCGCCTAT
ATCGCGCCCG GCGTGGTGCT GATGCCGTCG TTTGTGAACC TCGGCGCCTA TGTCGATAGC
GGCACGATGG TCGACACCTG GGCCACCGTC GGCTCCTGCG CGCAGATCGG CAAGAACGTG
CATCTCTCGG GTGGCGTCGG CATCGGCGGC GTGTTGGAGC CGATGCAGGC CGGCCCCACG
ATTATTGAGG ACAATTGCTT CATCGGCGCG CGCTCGGAAG TCGTGGAAGG CTGCATCGTG
CGCGAAGGCT CCGTCCTTGG CATGGGCGTC TTTATCGGCC AGTCGACCAA GATCGTGGAC
CGCGAGACCG GCGATGTGAT GTATGGCGAA GTGCCGTCAG GGTCCGTTGT CGTGGCGGGC
TCCCTCCCGT CCAAGAACGG CGTGAACCTT TACTGCGCGG TCATCGTGAA GCGCGTGGAT
GAGAGGACGC GCTCCAAAAC CTCCATCAAC GAGCTGTTGC GCGACTGA
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| Protein sequence | MSNAQLETAI EAAWEARDTI TPATMGETRE AIEDTLAALD GGTLRVAEKQ DSGDWHVNQW
AKKAVLLGFR LKDMEMQGGS AQGGSWWDKV DSKWATWGDN EWGAAGFRAV PNCVVRKSAY
IAPGVVLMPS FVNLGAYVDS GTMVDTWATV GSCAQIGKNV HLSGGVGIGG VLEPMQAGPT
IIEDNCFIGA RSEVVEGCIV REGSVLGMGV FIGQSTKIVD RETGDVMYGE VPSGSVVVAG
SLPSKNGVNL YCAVIVKRVD ERTRSKTSIN ELLRD
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