| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0328 |
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| Symbol | |
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| ID | 3932768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 333458 |
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| End bp | 334147 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637902673 |
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| Product | ABC transporter related |
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| Protein accession | YP_508270 |
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| Protein GI | 89052819 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG3840] ABC-type thiamine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01277] thiamine ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.460125 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCATC TTGAAAACAT CCGCGTGCGA CAGGGCAGCT TCACGCTGTC CGCCCATCTC
ACCATCGCGA AAGGCGCGCG GGTTGCGCTG ATGGGCGCCT CGGGCAGCGG GAAATCGACA
TTGCTCTCAA CCCTCTCGGG GTTCCTTTGG CCGGATGCGG GACGGATCAC CATGGCGGGA
GCAGATGTCG CGAAGACACC CGTTGCGGAC CGCCCGATTT CGATCCTGTT CCAGGACGGC
AATCTGTTCC CCCACCTCAG CGTGTTCGAC AATGTCGCGC TTGGGATCAG GCCAAACCTC
AAACTTGGAT CTGAGGATGA ACGGCGCGTG ACACGGGCCC TGACACAGGT GGGTCTGGAG
GGCATGGAAC AACGAAAACC ATCGGCCCTG TCGGGTGGGC AGCAAAGCCG GGTGGCGCTG
GCGCGAATGC TTCTCCGCGA CAAACCGGTC GCACTTCTGG ATGAACCGTT CTCAGCGCTG
GATCCCGGTT TGCGGCGCGA GATGCTGAGC CTTGTGCGTA AGCTTTGTGA CGAGACGGGG
CAGACGCTGA TCATGGCGAC ACACGATCTG CGCGATGCGG AACGGCTGTG TGATCGCGTG
CTGCTGTTGG ACGACGGCAA GGTCGTGCTG GATGCGCCCC TAGCCGAGGC TGTGGCAAAC
AACGCCGAGC CGCTGCGTCC CTGGATGTAG
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| Protein sequence | MLHLENIRVR QGSFTLSAHL TIAKGARVAL MGASGSGKST LLSTLSGFLW PDAGRITMAG
ADVAKTPVAD RPISILFQDG NLFPHLSVFD NVALGIRPNL KLGSEDERRV TRALTQVGLE
GMEQRKPSAL SGGQQSRVAL ARMLLRDKPV ALLDEPFSAL DPGLRREMLS LVRKLCDETG
QTLIMATHDL RDAERLCDRV LLLDDGKVVL DAPLAEAVAN NAEPLRPWM
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