Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0325 |
Symbol | |
ID | 3932765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 330608 |
End bp | 331183 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637902670 |
Product | ubiquinol-cytochrome c reductase, iron-sulfur subunit |
Protein accession | YP_508267 |
Protein GI | 89052816 |
COG category | [C] Energy production and conversion |
COG ID | [COG0723] Rieske Fe-S protein |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.926242 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAGATA CGCATGATCC GTCCGGCGAT CGCCGGGATT TTCTGTACTA CGCCACGGCC GGTACCGGTG TGGTGGTCGC AGGTGCAGCG GCTTGGCCGC TGGTGAACTC CATGAACCCA TCCGCTGACG TACAGGCGGC CAGCCAATTG CGGGTCGACG TCGGAGGTGT CGAGCCCGGC ACGCAGCTGA CGGTCCTGTT CCTGGGCAAG CCGATCTTCA TCCGTCGCCG CACGGAAGAC GAGATCGAAG CAGGCCGCGC GGTTGAGGTC AGCGAGTTGA TCGATGCCAA CGCACGCAAC GCCAACGATG AGAGTGCTGA TGCCGCAGAC ATCAACCGGA CCCTGACCAC GTCAGACGGT GAAAACTCCG GCGAGTGGCT GGTGATGCAG GGCGTCTGTA CGCACTTGGG TTGCGTGCCC ATTGGCGAAG GCGCTGGTGA CTTCGGTGGC TGGTTCTGCC CCTGCCACGG CTCTCACTAT GACACGGCAG GCCGCATCCG TCGCGGCCCT GCGCCCGAGA ACCTGCCCAT TCCTGCGGCA GAGTTTATCG ACGATTCAAC CATTTTGCTC GGTTAA
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Protein sequence | MSDTHDPSGD RRDFLYYATA GTGVVVAGAA AWPLVNSMNP SADVQAASQL RVDVGGVEPG TQLTVLFLGK PIFIRRRTED EIEAGRAVEV SELIDANARN ANDESADAAD INRTLTTSDG ENSGEWLVMQ GVCTHLGCVP IGEGAGDFGG WFCPCHGSHY DTAGRIRRGP APENLPIPAA EFIDDSTILL G
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