Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0319 |
Symbol | |
ID | 3932759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 326486 |
End bp | 327745 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637902664 |
Product | MiaB-like tRNA modifying enzyme |
Protein accession | YP_508261 |
Protein GI | 89052810 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGC CAGTGTTCCA CACGCTTGGC TGCCGTCTCA ACGCCTATGA GACCGAGGCA ATGCGTGAGA TGACGGCTCA GGCGGGCCTC GAAAACGCCG TCGTGGTGAA CACCTGCGCG GTGACGGCGG AAGCGGTTCG CAAGGCCCGG CAGGAAATTC GCAAGCTGCG GCGGGACAGT CCCGGCGCGA AGGTCATCGT CACCGGCTGC GCCGCCCAGA CCGAGCCTGC GACGTTCGAG GCGATGGAAG AGGTGGACCT CGTCCTCGGC AATTCCGAGA AGATGACCCC GGAGACGTGG CAGGCGATGC CCGCAGACTT TATCGGCAAC ACCGAGAAGG TTCGCGTCGA TGACATCATG TCAGTGACGG AGACGGCGCA GCATCTGATC GACGGCTTCG GGACGCGGTC CCGCGCTTAT GTTCAGGTGC AAAATGGCTG CGATCATCGC TGCACGTTCT GCATTATTCC ATATGGGCGC GGGAATTCTC GGTCAGTCCC AGCGGGCGTT GTTGTGGATC AGATCAAGCG GTTGGTGGAT CGTGGGTATA ATGAAGTCGT GCTGACCGGC GTCGATATGA CGTCCTGGGG CGCGGACCTG CCTGCTGCGC CCAGACTTGG CGATCTGGTC ATGCGCATCC TCAAACTTGT GCCGGACCTG CCCCGCCTGC GGATCAGTTC CATCGACTCG ATCGAAGTGG ACGACGCGCT GATGCAGGCC ATCGCGACGG AGCCGCGTCT GATGCCGCAT CTCCACCTCA GCCTGCAACA TGGCGACGAC CTGATCCTCA AGCGGATGAA GCGGCGACAT CTTCGGGATG ACGCGATTGC ATTTTGCGAA GAGGCGCGTC GCCTACGGCC CGAGATCACG TTCGGGGCTG ATATCATCGC TGGCTTCCCG ACCGAGACGG AGGCGCATTT CCAGAACTCC GTGAAGCTGG TGGAGGAGTG TGATCTGACG TGGCTGCACG TCTTCCCCTA TAGTCCACGT GAAGGGACCC CTGCGGCCAG AATGCCGGCT GTTGATGGTC CAACGATCAA GGCGCGCGCA AAGCAGCTTC GGGCCAAAGG TGAGGCTGCC GTTAACGCGC ACCTGTCCAA ACAGATAGGG CAATTGCACA ACATCCTGAT GGAAAGCCCT AAAATTGGGC GGACTGAACA GTTCACGGAG GTTGTCTTCG CCGAGGATCA ACCCGAAGGA GAGATTGTAA GCGCATACAT AACTGGGCAG ACGGATCGAC AGCTACTGGT CGCGTCCTGA
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Protein sequence | MSAPVFHTLG CRLNAYETEA MREMTAQAGL ENAVVVNTCA VTAEAVRKAR QEIRKLRRDS PGAKVIVTGC AAQTEPATFE AMEEVDLVLG NSEKMTPETW QAMPADFIGN TEKVRVDDIM SVTETAQHLI DGFGTRSRAY VQVQNGCDHR CTFCIIPYGR GNSRSVPAGV VVDQIKRLVD RGYNEVVLTG VDMTSWGADL PAAPRLGDLV MRILKLVPDL PRLRISSIDS IEVDDALMQA IATEPRLMPH LHLSLQHGDD LILKRMKRRH LRDDAIAFCE EARRLRPEIT FGADIIAGFP TETEAHFQNS VKLVEECDLT WLHVFPYSPR EGTPAARMPA VDGPTIKARA KQLRAKGEAA VNAHLSKQIG QLHNILMESP KIGRTEQFTE VVFAEDQPEG EIVSAYITGQ TDRQLLVAS
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