Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0260 |
Symbol | |
ID | 3932698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 261005 |
End bp | 262174 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637902603 |
Product | phosphoserine aminotransferase |
Protein accession | YP_508202 |
Protein GI | 89052751 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG1932] Phosphoserine aminotransferase |
TIGRFAM ID | [TIGR01365] phosphoserine aminotransferase, Methanosarcina type [TIGR01366] phosphoserine aminotransferase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTACGA CACCAACGGC CACGCGGCCG ACTTTGAAGC CTGTCGCCAC GCCGGCGAAC CCACGCTTTT CATCTGGCCC CTGCGCCAAA CCCCCCACAT GGACACCTGG CGTCTTGGCC GACGCGCTTT TGGGCCGGTC GCATCGCGCG GCGGAGGGCA AAGCAAAGCT GAAGCTGGCC ATCGATAAAA CGGCAGAGAT CTTGGGTGTG CCCGACGGCT ATCGCGTTGG CATCGTGCCA GCGTCTGACA CGGGCGCGGT CGAAATGGCC ATGTGGTCGC TGCTCGGTGC CCGGCCCTGT ACGATGCTCG CCTGGGAAAG TTTTGGCGCA GGTTGGGTGA CGGATGCGGT CAAGCAACTG AGCCTTGATG CGACAGTCAC GACCGCTGAT TACGGCGATT TGCCTGATCT GACGGCCGTC GACTGGAACA CCGATGTGGT CTTCACTTGG AATGGCACGA CCTCCGGCGT TCGTGTGCCA AACGGTGACG TGATCCCGGC GGATCGCGAG GGTCTGACAA TTTGCGATGC GACGTCGGCT GCGTTTGCGC AGGATCTGCC GTGGGACAAG CTCGACGTCA CCACATTCTC CTGGCAGAAG GTCATGGGCG GTGAAGCGGC CCACGGGATG ATTGTCCTCA GCCCCCGCGC GATTGAACGG CTGGAATCCT ACACCCCCGC CTGGCCCCTG CCGAAGATCT TCCGCCTCAC CAAAGGCGGC AAGCTGATCG AGGGCATCTT CACCGGGGCC ACAATCAACA CGCCGTCGAT GCTGTGTGTC GAAGACTACC TCTTCGCGCT GGATTGGGCG GAAAGCATCG GTGGCCTCCC GGCGCTGCAC GCCCGTGCGG ATGCCAATGC AAACGCGATC CACACCTTTT GCGAGGCGCG CGATTGGATC ACCAACCTCG CCAATGACCC TGCGACGCGG TCCAACACCT CCGTCTGCCT GAAGTTCACC GATGCGCGCA TCCACGACGG GGCCGCCTTC GCCAAAGCCG TTGCCAAACG CCTCGCCGAT GAGAACATTG CGCTCGACAT CGGAGCCTAC CGCGATGCAC CCGCAGGCCT TCGCATCTGG TGCGGCGCCA CCGTTGAGAC ATCGGATATC GACGCCATGC TCCCCTGGCT CGACTGGGCG TTCCATTTGG AAATCGAAGC GCAGGCCTAA
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Protein sequence | MVTTPTATRP TLKPVATPAN PRFSSGPCAK PPTWTPGVLA DALLGRSHRA AEGKAKLKLA IDKTAEILGV PDGYRVGIVP ASDTGAVEMA MWSLLGARPC TMLAWESFGA GWVTDAVKQL SLDATVTTAD YGDLPDLTAV DWNTDVVFTW NGTTSGVRVP NGDVIPADRE GLTICDATSA AFAQDLPWDK LDVTTFSWQK VMGGEAAHGM IVLSPRAIER LESYTPAWPL PKIFRLTKGG KLIEGIFTGA TINTPSMLCV EDYLFALDWA ESIGGLPALH ARADANANAI HTFCEARDWI TNLANDPATR SNTSVCLKFT DARIHDGAAF AKAVAKRLAD ENIALDIGAY RDAPAGLRIW CGATVETSDI DAMLPWLDWA FHLEIEAQA
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