Gene Jann_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0260 
Symbol 
ID3932698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp261005 
End bp262174 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content63% 
IMG OID637902603 
Productphosphoserine aminotransferase 
Protein accessionYP_508202 
Protein GI89052751 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1932] Phosphoserine aminotransferase 
TIGRFAM ID[TIGR01365] phosphoserine aminotransferase, Methanosarcina type
[TIGR01366] phosphoserine aminotransferase, putative 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACGA CACCAACGGC CACGCGGCCG ACTTTGAAGC CTGTCGCCAC GCCGGCGAAC 
CCACGCTTTT CATCTGGCCC CTGCGCCAAA CCCCCCACAT GGACACCTGG CGTCTTGGCC
GACGCGCTTT TGGGCCGGTC GCATCGCGCG GCGGAGGGCA AAGCAAAGCT GAAGCTGGCC
ATCGATAAAA CGGCAGAGAT CTTGGGTGTG CCCGACGGCT ATCGCGTTGG CATCGTGCCA
GCGTCTGACA CGGGCGCGGT CGAAATGGCC ATGTGGTCGC TGCTCGGTGC CCGGCCCTGT
ACGATGCTCG CCTGGGAAAG TTTTGGCGCA GGTTGGGTGA CGGATGCGGT CAAGCAACTG
AGCCTTGATG CGACAGTCAC GACCGCTGAT TACGGCGATT TGCCTGATCT GACGGCCGTC
GACTGGAACA CCGATGTGGT CTTCACTTGG AATGGCACGA CCTCCGGCGT TCGTGTGCCA
AACGGTGACG TGATCCCGGC GGATCGCGAG GGTCTGACAA TTTGCGATGC GACGTCGGCT
GCGTTTGCGC AGGATCTGCC GTGGGACAAG CTCGACGTCA CCACATTCTC CTGGCAGAAG
GTCATGGGCG GTGAAGCGGC CCACGGGATG ATTGTCCTCA GCCCCCGCGC GATTGAACGG
CTGGAATCCT ACACCCCCGC CTGGCCCCTG CCGAAGATCT TCCGCCTCAC CAAAGGCGGC
AAGCTGATCG AGGGCATCTT CACCGGGGCC ACAATCAACA CGCCGTCGAT GCTGTGTGTC
GAAGACTACC TCTTCGCGCT GGATTGGGCG GAAAGCATCG GTGGCCTCCC GGCGCTGCAC
GCCCGTGCGG ATGCCAATGC AAACGCGATC CACACCTTTT GCGAGGCGCG CGATTGGATC
ACCAACCTCG CCAATGACCC TGCGACGCGG TCCAACACCT CCGTCTGCCT GAAGTTCACC
GATGCGCGCA TCCACGACGG GGCCGCCTTC GCCAAAGCCG TTGCCAAACG CCTCGCCGAT
GAGAACATTG CGCTCGACAT CGGAGCCTAC CGCGATGCAC CCGCAGGCCT TCGCATCTGG
TGCGGCGCCA CCGTTGAGAC ATCGGATATC GACGCCATGC TCCCCTGGCT CGACTGGGCG
TTCCATTTGG AAATCGAAGC GCAGGCCTAA
 
Protein sequence
MVTTPTATRP TLKPVATPAN PRFSSGPCAK PPTWTPGVLA DALLGRSHRA AEGKAKLKLA 
IDKTAEILGV PDGYRVGIVP ASDTGAVEMA MWSLLGARPC TMLAWESFGA GWVTDAVKQL
SLDATVTTAD YGDLPDLTAV DWNTDVVFTW NGTTSGVRVP NGDVIPADRE GLTICDATSA
AFAQDLPWDK LDVTTFSWQK VMGGEAAHGM IVLSPRAIER LESYTPAWPL PKIFRLTKGG
KLIEGIFTGA TINTPSMLCV EDYLFALDWA ESIGGLPALH ARADANANAI HTFCEARDWI
TNLANDPATR SNTSVCLKFT DARIHDGAAF AKAVAKRLAD ENIALDIGAY RDAPAGLRIW
CGATVETSDI DAMLPWLDWA FHLEIEAQA