Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0227 |
Symbol | |
ID | 3932664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 221796 |
End bp | 222392 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637902569 |
Product | hypothetical protein |
Protein accession | YP_508169 |
Protein GI | 89052718 |
COG category | [S] Function unknown |
COG ID | [COG5375] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCCGTG ATAACCTTTA TTCCAAAGCT GTGATGTGGG TGAAAATCAT CCTTCCCCTT GTGGCGCTTG GACTTTTGTC ATCGATCTTT CTTCTGGCAA ATGCGCCTGA CCCGGATGAC GCGTTGCCCT ACGCTGACGT CGATATTGAA CAGATCACCC GGCGGCAGAC CGTCACTGAA CCGCGCTTTG CGGGCATTCT GGGCGACGGG CAGGAAATCG TGTTGATCGC AGACACAGTG ACTGCGGATG TCGATCAGAC CGACCAGTTT CTGGCCCGCA TGGTTGACGG GCGCATGGAT ATGGGCCTGA CGGAGGAGTT GATGATCCGC GCGGACTTAG GTGACATCGA CATGGCCGCG CAATTGGCGA CGCTGACCGA TGATGTGGTT CTGCACACCA CGGACGGCTA CCGCATGGTG AGTGAGGTCG TGATCATGGC GCTTGACGTG GTGAACATGC GCTCTCCGGT GCCGGTCCAT GTCACAGGCC CGGGCATTGA TGTGACAGCC GACACCATGG AATTGACCGG CCCGGATGGA GAGACAATCC TGCATTTCAA CGGCTCCGTC AGGGTGCTAT ACGACCCGCA AAGCTGA
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Protein sequence | MARDNLYSKA VMWVKIILPL VALGLLSSIF LLANAPDPDD ALPYADVDIE QITRRQTVTE PRFAGILGDG QEIVLIADTV TADVDQTDQF LARMVDGRMD MGLTEELMIR ADLGDIDMAA QLATLTDDVV LHTTDGYRMV SEVVIMALDV VNMRSPVPVH VTGPGIDVTA DTMELTGPDG ETILHFNGSV RVLYDPQS
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