Gene Jann_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0215 
Symbol 
ID3932652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp210040 
End bp210837 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content61% 
IMG OID637902557 
Product3'(2'),5'-bisphosphate nucleotidase 
Protein accessionYP_508157 
Protein GI89052706 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 
TIGRFAM ID[TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCACG AGAAAATTGT TGCCGTCATG CGTACCGCTG CCCTGGAGGC CGGCGACGCG 
ATCATGGAGG TTTATGGCGC GGAGGATTTC GACGTGAAGG TGAAATCCGA CGATAGCCCT
GTGACAGAGG CGGATGAGGC GGCGGATGCC ATCATTTCCC GGCACCTGCG CGCGGCGTTT
CCGGACGTGA CGTTGATCAC CGAAGAACAG GCCGACAGCC ATGGGCTGAG CGCGGATCAG
TTCCTGATCG TGGACCCGTT GGACGGCACC AAAGAGTTCA TCAAGCGGCG CGGCGATTTC
ACGGTGAACA TCGCCTTGGT GGAACATGGC GTACCTGTGC GTGGCATCGT TTATGCGCCC
GCGAAGGGGC GTCTGTTTTA CACAAATGCC GACGGAGTGA GCATTGAGGA GGCAGGCCCG
TTCGAGCCGA ATGCGCCTGG CAGGCTCGAT CCAATCACAG TGTCACGCCC GGATAACAGC
GCGTTGCGCG TCGTGGCGTC GAAGTCGCAC CGGGATCAGG CAACAGACCA CTACATCAAC
AAATACGACC ACGCGGATAT GAAAAGCGCA GGGTCATCGC TGAAGTTCTG CCTTGTCGCG
ACGGGGGAGG CGGATTTGTA CCCCCGCCTT GGCCGCACGA TGGAATGGGA TACCGCGGCA
GGCGATGCCG TGTTGCGCGG GGCCGGTGGC AAGATGGTCC GGTTTGAGGA TCATGCGCCG
TTTGAATACG GCAAGGACGG GTTCGCCAAC GGCTTCTTCA TTGCCTACGC CCCGGGTCTG
GAATTGCAGC TGCCGTGA
 
Protein sequence
MDHEKIVAVM RTAALEAGDA IMEVYGAEDF DVKVKSDDSP VTEADEAADA IISRHLRAAF 
PDVTLITEEQ ADSHGLSADQ FLIVDPLDGT KEFIKRRGDF TVNIALVEHG VPVRGIVYAP
AKGRLFYTNA DGVSIEEAGP FEPNAPGRLD PITVSRPDNS ALRVVASKSH RDQATDHYIN
KYDHADMKSA GSSLKFCLVA TGEADLYPRL GRTMEWDTAA GDAVLRGAGG KMVRFEDHAP
FEYGKDGFAN GFFIAYAPGL ELQLP