Gene Jann_0203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0203 
Symbol 
ID3932640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp194836 
End bp195741 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content54% 
IMG OID637902545 
Productchromosome segregation DNA-binding protein 
Protein accessionYP_508145 
Protein GI89052694 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.435492 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGTG GCACAGAGAA ACGTGGACTT GGACGAGGGC TGTCGGCCCT TATGGCGGAT 
ATCGAACCAA CAGCCTCAAC ACATCCTGAC GATGCGCAAA CATCTGCCAC AACGTCTCGT
GGCAACCGGT TTATCCCGGT TGAACAGATT GTCCCAAACC CGGATCAACC CCGGCGACAG
TTTTCACAAG ATAGCCTGAA TGAGTTGGCG GCGTCCATCC GGGAAAAGGG CGTCATTCAA
CCTCTTATTC TACGTCCTGA TCCTAAGGAT CAGCAGCGGT TCCAGATCGT TGCCGGGGAA
CGGCGGTGGC GCGCCGCACA GATCGCCCAA TTGCATGAAC TGCCAGCTAT TGTTCGGGAG
TTCAACGACA CCGAAGTTCT CGAAGTTGCG ATCATCGAGA ATATCCAACG CGCTGATCTT
AACCCTGTGG AGGAGGCACA AGGCTACCGT CAGCTGATGG AGAAATTCGG ACACACCCAA
GATCAACTCG CAACTGCAAT GGGCAAAAGC CGCAGCCATC TGGCCAACAC GATGCGGCTT
CTGCAGCTTC CTGACGAAAT TCTGACGTTC GTGCAAGACG GGAAGCTCTC CGCGGGTCAT
GCGCGCGCGC TGATCACTGC CGAAGACCCC CTTGGGCTTG CGCTGCGGGC TGTTAAAGAG
GGTCTGTCGG TACGGGAGGT CGAAAGGGCC GCGAAATCCA CCAAGAACAC TCGCAAGAAC
AAGGCACAAT CCAAATCGTC AAACAAAGAC GCAGACACGC GAATTATTGA AAGTGATCTG
TCTCGCATCC TAGGCATGAG CGTGGTTATT GATCATGACA CTGATGCTGG TGGAGGTAAA
TTATCTATTA AATACAAAGA TTTGGCGCAA CTCGACGACC TGCTTCGACT ACTGAACACA
AACTGA
 
Protein sequence
MARGTEKRGL GRGLSALMAD IEPTASTHPD DAQTSATTSR GNRFIPVEQI VPNPDQPRRQ 
FSQDSLNELA ASIREKGVIQ PLILRPDPKD QQRFQIVAGE RRWRAAQIAQ LHELPAIVRE
FNDTEVLEVA IIENIQRADL NPVEEAQGYR QLMEKFGHTQ DQLATAMGKS RSHLANTMRL
LQLPDEILTF VQDGKLSAGH ARALITAEDP LGLALRAVKE GLSVREVERA AKSTKNTRKN
KAQSKSSNKD ADTRIIESDL SRILGMSVVI DHDTDAGGGK LSIKYKDLAQ LDDLLRLLNT
N