| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0196 |
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| Symbol | aroE |
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| ID | 3932633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 187014 |
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| End bp | 187850 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637902538 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_508138 |
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| Protein GI | 89052687 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGAG ACACCATTCC CCTCGCCGGT GTGATCGGTG ATCCGATTTC TCACTCCCTG
TCGCCGCGTT TGCACGGTCA TTGGTTGCGG CGGTACGGGC TGCAGGGCCA TTATGTTCCT
TTGCACGTTA ATCATGCCAA TCTGGAGACG GTCCTAAGAA CGTTACCGCT AATGGGGTTC
GTCGGGGTGA ACGTGACCCT GCCGCACAAG GAACATGTCC TGTCCATCGC TGATTCTGTC
ACGGACCGGG CCGCGTTGAT CGGCGCGGCC AATACTCTGA CCTTCACCGC AAACGAACAG
ATACAGGCAG ACAACACTGA TGGTATGGGG TTCCTGTCCA ATATTCGCCA AGCCTTGCCT
GGTTGGTCCG CCTCCGCGGG GCCAGCGCTT GTCTTGGGGT CCGGCGGTGC GGCGAAAGCC
ATCGTGTCTG CGCTTGTGTC CGACGGGGCT CCGGTCGTTC ATGTGGCCAA CAGGACGCGG
GCCCGGGCCG ATGGACTGAA AGAACAGTTT GGGGCCCGGG TGTCTCCATC CGATTGGACC
CATATTCCAG ACCTCATCGG CGATGCGGCC CTGATCGTGA ATACCACGTC CCTGGGAATG
GCGGGCCAAA GTCCTCTGTC TTTAGACTTG TCACGACTTT CGCCGCCCAC TGTGGTGACA
GACATCGTTT ACGCCCCGCT ACAAACGAAC CTTCTGAGAG ACGCGAGCAT ACGCGGATGT
GAGACAGTCG ATGGCCTCGG TATGCTGCTT CATCAAGCGG TTCCCGGGTT TGAGCGATGG
TTCAATTACA CGCCGACCGT TGATGAGGAC CTTCGCGAAG CTGTGCTGGC CGGATGA
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| Protein sequence | MTRDTIPLAG VIGDPISHSL SPRLHGHWLR RYGLQGHYVP LHVNHANLET VLRTLPLMGF
VGVNVTLPHK EHVLSIADSV TDRAALIGAA NTLTFTANEQ IQADNTDGMG FLSNIRQALP
GWSASAGPAL VLGSGGAAKA IVSALVSDGA PVVHVANRTR ARADGLKEQF GARVSPSDWT
HIPDLIGDAA LIVNTTSLGM AGQSPLSLDL SRLSPPTVVT DIVYAPLQTN LLRDASIRGC
ETVDGLGMLL HQAVPGFERW FNYTPTVDED LREAVLAG
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