| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0127 |
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| Symbol | |
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| ID | 3932563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 117053 |
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| End bp | 117940 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637902468 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_508069 |
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| Protein GI | 89052618 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAAG ATCTCGACTG GACCCTCCTG CGTGCCGTGC TGGCGGTGGC CGATACCGGG
TCCCTCTCAG GTGCGGCGGC ACAATTGACG CGCACCCAAC CGACCCTCGG ACGGCAAATC
AAGGCGGCTG AACAGGCCCT TGGCCAGCCA CTCTTCACGC GGCATGCGCG GGGCCTGACG
CCGACACCAT TCTGCGAAAC GCTTCTGCCC GCCGCGCAGC AAATGAACGA CGCTGCCAAG
GCTGTCTCTG TCCTCGCCGC CGGGCAATCG CCTGACACCT CCGGGCGCGT TCGGCTGACC
GCGTCCGTCT TCGTGACGGC CCATATCCTG CCCGGCATCC TTGCCGATAT CCGGGAGGCG
CACCCGAACA TCGCCCTCGA CATCGTCGCC TCCGACACGA CCGAAAACCT GCTGTTTCAC
GAGGCTGACA TCGCGCTGCG CATGTACCGA CCCACGCAGC TTGATATGAT CGCAAAGCAT
TTGGGGGATC TGCCGCTCGG CCTTTATGCG TCTGAGACAT ACATCGCACG CCACGGCACG
CCGCACAGCG CCGACGATCT GAAACACCAC CAGATGGTCG GCTACGACCG CTCGGACCTG
ATCCTGCGCG GGATGCGTGA GATGGGGATG GAGGTGACCC GCGCGTTCTT CACCACCTGC
ACCGATGATC AGGTCGCCTA TTGGAATTTC GTCGCCGCCG GATGTGGCAT CGGGATCGGG
CAGACCCTTG TGGCCGAGCG CACACCTGGC ATGCGGCGGA TCCTGCCTGA TCTGCGGTTG
CCCGTCTTAC CCGTTTGGCT GACAGCGCAT CCCGGCCTCC GCCATCAGCC CCGTGTTCAT
GCTGTCTGGA CCGCGCTCGA CACCGCAATC ACCCCGCTGC TTTCTTGA
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| Protein sequence | MDQDLDWTLL RAVLAVADTG SLSGAAAQLT RTQPTLGRQI KAAEQALGQP LFTRHARGLT
PTPFCETLLP AAQQMNDAAK AVSVLAAGQS PDTSGRVRLT ASVFVTAHIL PGILADIREA
HPNIALDIVA SDTTENLLFH EADIALRMYR PTQLDMIAKH LGDLPLGLYA SETYIARHGT
PHSADDLKHH QMVGYDRSDL ILRGMREMGM EVTRAFFTTC TDDQVAYWNF VAAGCGIGIG
QTLVAERTPG MRRILPDLRL PVLPVWLTAH PGLRHQPRVH AVWTALDTAI TPLLS
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