| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0126 |
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| Symbol | |
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| ID | 3932562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 116097 |
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| End bp | 116960 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637902467 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_508068 |
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| Protein GI | 89052617 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA CCGCCCTTAT CCTGGGATCC TCAGGCCGCT TCGGCCGTCA CATCTCGGAC
GCGCTGTCCC GCCACGGCTG GACCCTGCGC AAATTTGACC GAGCCCATGA CACGTTGCCC
GACGCGGCCA TGGGCGCGAG TTTGATCGTG AACGCGTGGA ACCCGCCGTA TTCACAATGG
GCGACACTCG TGCCCGACCT GACACGACAG GTGATCGGCG CGGCAAAAGC CTCAGGCGCT
GCGGTGATGA TCCCGGGCAA TATCTACGTC TATGGAGAGG ATTTGCCCCC TGTGTTGTCG
CCCGACACGC CGCATCGGTC CGCGCACCCT TTGGGGCAAA TTCGCCGGAC AATGGAATCC
GCTTATCGCG ATGCGGGTGT CAAAACGGTG ATCTTGCGGG CGGGCGACTA CATAGATACG
GAACAGGGCG GCAATTGGTT CGACAGGATC ATTGCGGCCA GGATTGGACA GGGAAAGGTC
AGCTATCCCG GACCGTTGAA CGCCCCCCAC GCCTGGGCGT TTCTGCCTGA TGTGGCGGAG
GCCGGCGCGC GATTGGCGGA TCAGATGGAC ACGCTGCCCC CCTTCAGTGA CTTCACCTTC
GACGGGTTTA CCCTGACAGG CGCAGAGATG ACGCAGGCTT TGGAGCGCGC GACCGGGCGA
CCTGTGCGGG CAAAGCAGAT GTCATGGTTA CCGATCCAGA TCGCGCGGCC CTTTTGGCGC
GAGGCCAAGC ATCTGCTGGA GATGCGATAT TTGTGGCGCA GGCCGCACGG TGTGGATGGC
AGCGCATTGC AGGCGCGGAT CAAGGGATAC AGGCCGACGC CGCTGGAAGA TGCCTTGCGT
CGGGCCGTGA CACCGCTGAT CTAG
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| Protein sequence | MTRTALILGS SGRFGRHISD ALSRHGWTLR KFDRAHDTLP DAAMGASLIV NAWNPPYSQW
ATLVPDLTRQ VIGAAKASGA AVMIPGNIYV YGEDLPPVLS PDTPHRSAHP LGQIRRTMES
AYRDAGVKTV ILRAGDYIDT EQGGNWFDRI IAARIGQGKV SYPGPLNAPH AWAFLPDVAE
AGARLADQMD TLPPFSDFTF DGFTLTGAEM TQALERATGR PVRAKQMSWL PIQIARPFWR
EAKHLLEMRY LWRRPHGVDG SALQARIKGY RPTPLEDALR RAVTPLI
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