| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0091 |
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| Symbol | |
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| ID | 3932527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 85871 |
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| End bp | 86794 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637902432 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_508033 |
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| Protein GI | 89052582 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.827237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATCA TCAACAACCC CTCCGGCTTG CGCCACGAGA TGCCCCAGGG CCACCCCGAA
CGCATCGCCA GGCTTGAGAC GGTCTTCGCG GTCCTTGCCG ACGTCAATGC CGAGCGAGTG
GAGGCCCCTT TGGGCACCGA GGACGATGTC GCCCTGTGCC ATCCGCAAGA CTACATCGAC
GCGATGCGTG AGGCGCAGCC AGCGCAAGGC ATGGTGCAGA TCGACGCCGA TACCAGCGCC
TCCCCGGGCA CATGGGAGGC CGCCATGCGT GGCGTCGGCG GCTGTCTTCT GGCCGTGGAC
CGTGTGCTGT CGGGTGCCCA TAAACGCGCC TTCGTGGCCA CGCGCCCTCC AGGGCACCAC
GCTGAAAAGA CCCGCGCCAT GGGGTTTTGC CTGTTCGGCA ACATCGCCAT TGCCGCCCGC
CACGCGTTGG AGCGCCATGG CCTGTCCCGG GTCGCCATCG TCGATTTTGA CGTCCACCAC
GGCAACGGCA CCCAGGATCT TCTGTGGGAT GAGCCGCGCG CGCTGTTTGT CTCGTCCCAC
CAGATGCCGC TCTACCCCGG ATCCGGCGCG GTCCATGAAC GCGGCGCGTC CGATAATGTG
CTGAACCTGC CGCTGCCGCC CGGGTCCGAT GGGCAGGCGA TGCGATCCCG CTACACATCC
CACGTCTTTC CCCGTCTCCG GGACTGGCAG CCGGACCTGA TCCTGATTTC CGCAGGATTT
GACGCCCATA CCCGCGACCC GCTTGCCAAT CTGCTATGGG AGGCTGAGGA CTTCGCCTGG
GTCACGCGCG AACTTGTGGC CCTCGCGGAG GAGGTCTGCG AAGGCCGCAT CGTCTCGACT
CTCGAAGGCG GGTATGATCT GCAAGGCCTA GGCGACGGCG TGCTCGCCCA TGTGAGAGAG
TTGGAGGATC GCGATGACGG ATAA
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| Protein sequence | MLIINNPSGL RHEMPQGHPE RIARLETVFA VLADVNAERV EAPLGTEDDV ALCHPQDYID
AMREAQPAQG MVQIDADTSA SPGTWEAAMR GVGGCLLAVD RVLSGAHKRA FVATRPPGHH
AEKTRAMGFC LFGNIAIAAR HALERHGLSR VAIVDFDVHH GNGTQDLLWD EPRALFVSSH
QMPLYPGSGA VHERGASDNV LNLPLPPGSD GQAMRSRYTS HVFPRLRDWQ PDLILISAGF
DAHTRDPLAN LLWEAEDFAW VTRELVALAE EVCEGRIVST LEGGYDLQGL GDGVLAHVRE
LEDRDDG
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