Gene Jann_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0090 
Symbol 
ID3932526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp85639 
End bp85881 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content60% 
IMG OID637902431 
Productexodeoxyribonuclease VII small subunit 
Protein accessionYP_508032 
Protein GI89052581 
COG category[L] Replication, recombination and repair 
COG ID[COG1722] Exonuclease VII small subunit 
TIGRFAM ID[TIGR01280] exodeoxyribonuclease VII, small subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATA AACCCATCGA TGAGATGAGC TTTGAGGACG CCATTCGCGA GCTGGAGCAG 
GTTGTCACGC AGCTGGACCG GGGCGATGTG GCGCTGGAAG ATTCCATCAA GCTGTATGAA
CGCGGCGCGG CCCTGAAGGC GCGGTGTGAG GCGAAGCTGA AAGAGGCGGA AGAAAAGGTC
GCGCAGATCA CGCTCGACGC CAATGGCCAG CCCACCGGAG CCAAAACGGT CGAAGGACTG
TAG
 
Protein sequence
MTDKPIDEMS FEDAIRELEQ VVTQLDRGDV ALEDSIKLYE RGAALKARCE AKLKEAEEKV 
AQITLDANGQ PTGAKTVEGL