Gene Jann_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0085 
Symbol 
ID3932521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp80321 
End bp80737 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content62% 
IMG OID637902426 
Producthypothetical protein 
Protein accessionYP_508027 
Protein GI89052576 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTATG ACACCATCTC AGCCGAAGAT TTCGGTCGAT CCCTAACGGG CATTGGCGTG 
AACCTTCTGA CCCGGGACGT CCGCGCGCTT GCCGCGTTCC TGCAGGACGT GTTCGGTCTG
AAAGCGCATC GCCTCTCCGA TGACTTCGCG ATCATCACCC ATGGCGACGC CGTGTTTCAA
CTCCACGCCG ATGGCACCTA TCATTCCAAC CCTTTGCCGC AATTGATCCC CGAAAACCCG
CCGCGGGGCG GGGGCGCTCA GTTTTACCTG TTCGGGATCG ACCCCGACGC CGCCGTGGCC
CGCGCGGGCA ATCAAATGGT GATCGAGCCG CCCGCCGACA AACCTCACGG TTTGAGAGAG
GCGACGATCC TGTCGCCGGA AGGCTATGCG TTCTCTCCGG CAGTGCCCCG TGCCTGA
 
Protein sequence
MDYDTISAED FGRSLTGIGV NLLTRDVRAL AAFLQDVFGL KAHRLSDDFA IITHGDAVFQ 
LHADGTYHSN PLPQLIPENP PRGGGAQFYL FGIDPDAAVA RAGNQMVIEP PADKPHGLRE
ATILSPEGYA FSPAVPRA