| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0082 |
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| Symbol | |
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| ID | 3932518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 76030 |
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| End bp | 77874 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637902423 |
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| Product | ABC transporter related |
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| Protein accession | YP_508024 |
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| Protein GI | 89052573 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGAA AATTTGAAAA TCTGGTCGAT CCCTATGTGG CGCATGCCCA ACAGGATCGC
CCCCCTCGCC GTCTGTGGCC GTTTCTTTGG GACTATTCGC AGCCCTTCAA AGGGCTCTTT
GCGCTGACCG CGTTCATGTC CGTGGTCGTG GCCACGATCG AGATCGGTCT GATCTGGTAT
ATGGGCCGCG TGGTGGACCT GATGACCCAA GGCGAACCGG CGCAGGTTCT GGCCGACTAC
GGGCTGGAAC TGACGCTGGC GGCGGTCTTC ATTCTGACGA TCCGGCCCAT CCTTCAAGGC
CTCGACGTGG CGCTTCTCAA CAACGCGATC CTGCCGCAGT TCGGCGCATT GGTCCGCTGG
CGCGCGCACA AACAAGTGCT GCGTCAAAGC GTTGGGTTCT TCGAGAACGA CTTTGCGGGC
CGCATCGCCA ATCGCATCAT GCAAACGCCG GGCAGCGCGG GCGACGCGAT CTTTCAGGTG
TTCGACGCGA TCACCTTTTC GCTCGCCTAT CTGGTGGGGG CGGCGATCCT GCTGATGGGC
TCCGACCCCC GGCTGGCCTT GCCGCTGATC GTCTGGTTCA CGCTCTATGC GCTGCTTCTG
CGGTGGACGA TGCGCCGGGT CGGGCCCGCG TCGCAAGCCG CCTCGGACGC GCGGTCGATG
ACAACGGGGC GCGTGGTGGA CAGCTACACC AACATCCACT CTGTCAAGCT TTTCGCGCAC
AACGAGACTG AACTGGCCTA CGCGAAGGAG GCGATTGAAT TCACCCGCCA GACCTTCGCG
AAAGAGATGC GGATCTTCAC CACGATGGAC GTAATGCTGG TGACGCTGAA CGGCTTCCTG
ATCGTGGCGG TCGTGGGCTG GGGCATCCTC TTGTGGTCCC AGGGCGCGGC CTCTGTCGGC
GTCGTCGCGG CGGCAACGGC CCTGGCATTG CGGCTCAGCG CCATGACCGG GTGGATCATG
TGGGCGGTGT CGACGTTCTT TCGGTCCCTT GGCATCGTGG CCGAGGGGAT GGAGACGATT
ACCGAACCGA TTGATCTGGT CGACACGCCC AACGCCCCCG CTCTACGCCT GACGGAGGGA
GAGATCGTTC TCGACTCGCT GTCCCACCAT TACGGGCGCG CTGCGGGTGG GCTGGACCAG
ATTTCCCTGA CCGTTAAGTC CGGTGAAAAG ATCGGCCTTG TGGGCCGCTC GGGGGCTGGG
AAATCGTCTC TAGTGAAGCT GTTGTTGCGG TTCTATGATG CCGAACAGGG CCGTATTCTG
ATCGATGGGC AGGACATCGC GACCGTCCAG CAAGACAGCT TGCGGCGCGT GATCGGGATG
GTGCAGCAGG ACAGCTCCCT CCTGCATCGG TCGGTGCGCG ACAACATCCT ATATGGCGCG
CCGGACGCGA CCGAAGAGGC GATGATCGAG GCTGCCAAAC GGGCGGAGGC GCACGACTTC
ATCCTCGACC TTCAAGACCC GCAGGGGCGC ACCGGCTATG ACGCCCATGT GGGCGAGCGC
GGCGTGAAAC TCTCCGGTGG GCAACGGCAG CGGGTGACGC TGGCCCGTGT GATCCTGAAA
AACGCCCCGA TTCTGGTGCT GGACGAGGCC ACAAGCGCGC TGGACTCCGA GGTCGAAGCG
CAAATCCAGG ACACGCTCTA TGGCGTGATG GAGGGTAAAA CGGTCATCGC CATTGCCCAC
CGCCTCAGCA CCATCGCGCA AATGGATCGG ATCATCGTTC TGGATGCCGG ACACATCGTT
GAAGACGGCA CTCACGACGC GCTTTTGGCC CAGGGCGGTC TATATGCCAG CTTCTGGGCG
CGCCAGTCGG GTGGCTTCAT CGGAACAGAG GAGGCTGCGG AATGA
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| Protein sequence | MFRKFENLVD PYVAHAQQDR PPRRLWPFLW DYSQPFKGLF ALTAFMSVVV ATIEIGLIWY
MGRVVDLMTQ GEPAQVLADY GLELTLAAVF ILTIRPILQG LDVALLNNAI LPQFGALVRW
RAHKQVLRQS VGFFENDFAG RIANRIMQTP GSAGDAIFQV FDAITFSLAY LVGAAILLMG
SDPRLALPLI VWFTLYALLL RWTMRRVGPA SQAASDARSM TTGRVVDSYT NIHSVKLFAH
NETELAYAKE AIEFTRQTFA KEMRIFTTMD VMLVTLNGFL IVAVVGWGIL LWSQGAASVG
VVAAATALAL RLSAMTGWIM WAVSTFFRSL GIVAEGMETI TEPIDLVDTP NAPALRLTEG
EIVLDSLSHH YGRAAGGLDQ ISLTVKSGEK IGLVGRSGAG KSSLVKLLLR FYDAEQGRIL
IDGQDIATVQ QDSLRRVIGM VQQDSSLLHR SVRDNILYGA PDATEEAMIE AAKRAEAHDF
ILDLQDPQGR TGYDAHVGER GVKLSGGQRQ RVTLARVILK NAPILVLDEA TSALDSEVEA
QIQDTLYGVM EGKTVIAIAH RLSTIAQMDR IIVLDAGHIV EDGTHDALLA QGGLYASFWA
RQSGGFIGTE EAAE
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