| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0062 |
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| Symbol | |
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| ID | 3932498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 57092 |
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| End bp | 58855 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637902403 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_508004 |
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| Protein GI | 89052553 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCA ACAGGCCAGA CAAATCCAGA TTGCCCAGTC GCCATGTGAC CGAAGGACCC
GAGCGCGCGC CGCATCGGTC GTATTTCTAC GCCATGGACC TGACACAGGA GCAGATCGAC
CAGCCATTCG TCGGCGTCGC CACCTGCTGG AACGAAGCGG CCCCTTGCAA CATCGCGCTC
AACTGGCAGG CGCAATCGGT GAAACGCGGT GTGGGTGAGG CGAACGGTAC GCCGAGGGAA
TTCACCACGA TCACCGTCAC CGACGGCATT GCGATGGGGC ATGAAGGGAT GCGGTCCTCG
CTGGCGTCGC GCGATGCGAT CACCGACACG GTGGAACTGA CGATGCGCGG CCACTGCTAT
GACGCATTGG TCGGGCTTGC CGGGTGCGAC AAGTCCCTGC CCGGCATGAT GATGGCCATG
GTGCGCCTGA ACGTGCCGTC CGTCTTCATC TATGGCGGCA CGATCCTTCC CGGCAAAGCG
CCTGAAGTTG CCGACATTCC CGCCGAGTTT GCCAACCGTG ACCTGACCGT GCAGGACATG
TTCGAGGCCG TGGGCAAGTA CCAGTCCGGC CAATTGAGCG AAGCCGCCCT GGAAGTTCTG
GAACGCGTTG CCTGCCCGTC TGCGGGCGCC TGTGGCGGTC AGTTCACCGC CAACACCATG
GCATGTGTGT CCGAGGCGAT TGGTCTGGCA ATGCTCAACT CCTCCGGGAT GCCTGCGCCT
TACGAGGGGC GGAAGGAATT CGGCGAGGCA AGCGGTCGCG CGGTGATGAA CCTGCTTGAA
AAGAACATCC GCGCCCGTGA CGTCGTCACC CGCAAAGCGT TGGAGAATGC GGCCCGTGTT
GTGGCGTGTA CCGGGGGCTC CACCAATGCA GGTCTGCACC TTCCCGCGAT TGCCCATGAG
GCCGGAATCG ACTTCGACCT CTTTGACGTC TGCGACATCT TCAAGGACAC GCCCTACTTC
GTCGACATGA AACCCGGCGG TCAGTATGTG GCGAAAGACC TCTATGAGGT GGGCGGCGTG
CCAGTCGTGA TGAAGGAGCT GTTGAAAGAG GGGCTGTTGC ACGGCGATTG CCTCACTGCC
TCTGGCGAGA CGATGGAAGA GGCGCTCGAC AAGATCCAGG GCACGCCCGA TGGCCGTGTG
GTCCATACGG TCCAGAACCC GATCACCAGC ACCGGCGGCG TGGTCGGCCT GCGCGGCAAT
CTCGCCGAAG AGGGTGCGAT CGTGAAAGTT GCGGGCATGG ATGAGGCAAG CCAGGTCTTC
ACCGGACCCG CGCGCGTGTT TGAATGCGAA GAAGACGCCT TTGCCGCCGT GAAGGCGCGC
GGCTACGAGG AAGGCGAAGT CATTGTCATC CGCAATGAAG GGCCAAAGGG CGGCCCGGGC
ATGCGGGAAA TGTTGGCGAC GACGGCGGCA TTGTCGGGTC AGGGCATGGG CAAGAAGGTG
GCCCTGATCA CCGACGGCCG GTTCTCTGGT GCAACGCGGG GCTTCTGCGT CGGTCACGTG
GGACCTGAGG CGGCTGTTGG CGGACCGATT GGTCTGCTGG AGAACAGCGA CATGATCACC
ATCAATGCGC TGACGGGGGA ACTGTCGGTT GCCTTGACCG AGGCGGAATT GGCCGAGCGT
CGGAAGGCCT GGGCCGGTCC GCGTGAGACA ATGTACGCCT CTGGCGCGTT GTGGAAATAC
GCGCAATTGG TGGGAGAGGC GCGCTATGGC GCGGTGACCC ATCCCGGCGG GGCCAAGGAA
AAGCACGTCT ATGCGGACAT CTAG
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| Protein sequence | MTANRPDKSR LPSRHVTEGP ERAPHRSYFY AMDLTQEQID QPFVGVATCW NEAAPCNIAL
NWQAQSVKRG VGEANGTPRE FTTITVTDGI AMGHEGMRSS LASRDAITDT VELTMRGHCY
DALVGLAGCD KSLPGMMMAM VRLNVPSVFI YGGTILPGKA PEVADIPAEF ANRDLTVQDM
FEAVGKYQSG QLSEAALEVL ERVACPSAGA CGGQFTANTM ACVSEAIGLA MLNSSGMPAP
YEGRKEFGEA SGRAVMNLLE KNIRARDVVT RKALENAARV VACTGGSTNA GLHLPAIAHE
AGIDFDLFDV CDIFKDTPYF VDMKPGGQYV AKDLYEVGGV PVVMKELLKE GLLHGDCLTA
SGETMEEALD KIQGTPDGRV VHTVQNPITS TGGVVGLRGN LAEEGAIVKV AGMDEASQVF
TGPARVFECE EDAFAAVKAR GYEEGEVIVI RNEGPKGGPG MREMLATTAA LSGQGMGKKV
ALITDGRFSG ATRGFCVGHV GPEAAVGGPI GLLENSDMIT INALTGELSV ALTEAELAER
RKAWAGPRET MYASGALWKY AQLVGEARYG AVTHPGGAKE KHVYADI
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