| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0055 |
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| Symbol | |
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| ID | 3932491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 49859 |
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| End bp | 51106 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637902396 |
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| Product | major facilitator transporter |
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| Protein accession | YP_507997 |
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| Protein GI | 89052546 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGCC AAGCCCCCCT GATGACCCCT GTCCTGATAG GTGGCTGTGC GATTATCCTG
ATCTGCTTCG CGATCCGTGC AAGCTTCGGC GTGTTCCAGA TCCCCATCGC GGAGGAGTTC
GGTTGGCTGC GGGCCGAATT CAGCCTCGCC ATCGCGATCC AGAACCTTGC CTGGGGGATC
GGGCAGCCGT TTTTCGGCGC GATTGCCGAG AAATTCGGGG ACCGCAAGGC GATTGTCCTG
GGCGTCGCAT TCTATGTGGT GGGTCTTTCC GTGTCTGCCT TTGCCGTCAC GCCGGGGCAG
CATCAGGTGC TGGAATTCCT TGTCGGGCTT GGCATCGCGG GCACGGGCTT TGGGGTAATC
CTTGCTATGG TCGCGCGGGC TGCCTCGGAT GAAAACCGCT CCATGACACT TGGCATCGTC
ACGGCGGTTG GCTCCGGTGG GCAGATCATC GGCCCGCCCC TGGCCGAGGC GCTTCTGGCC
AGCTTCCCCT GGCAAACTGT GTTTTTGATC TTCGCAGGCA TCGTTTTCGC GTCTCTGGTG
TTCCTGCCGC TCCTCCGCGC GCCAGAGCGC CCGTCCTCGC CGGCGCTGGA AGAGACCATG
TCCCAGATCC TCGGCAAGGC ACTCCGCGAC CCCTCGTTCA CCTTAATCTT CGTGGGCTTC
TTCTCCTGCG GCTACCAACT GGGGTTCATC ACGGCCCACT TCCCGGCCTT CATCACTGAA
TTCTGCGGCC CAATCGCGCC GGGCGGCGTG TTGCATTCCA TCGGGGTGAC GACCACATCG
GCCCTCGGCG CCCTGGCGAT CGCGGTCATC GGTGCGGCCA ATATCGGCGG CACGCTTCTG
GCGGCGTATC TGGGCAAGAC CTATTCCAAG AAGAACCTCT TGGCAGCGAT CTACACCGGT
CGAACGATTG TCGCGACGAT CTTCATCCTG CTGCCCATCA CACCCACCTC CGTGATCGTA
TTTTCCGCCG CGATGGGGTC CCTCTGGTTA GCCACCGTTC CGCTGACGAG CGGTCTTGTG
GGGTACATCT ATGGGCTACG ATACATGGGA ACGCTCTATG GCATCGTGTT CTTCAGCCAC
CAGTTGGGCA GCTTCATGGG TGTCTGGCTG GGAGGTGCGC TTTTCGACGC TTACGGGGAC
TACACCGCTG TTTGGTGGGT CGGGATCGGC GTCGGGGTGC TCAGCGCGAT CATCCACTTG
CCGATCAAGG AAACGCCGCT GGGTCTGCGC GCGCCCACAC CGGCCTGA
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| Protein sequence | MDRQAPLMTP VLIGGCAIIL ICFAIRASFG VFQIPIAEEF GWLRAEFSLA IAIQNLAWGI
GQPFFGAIAE KFGDRKAIVL GVAFYVVGLS VSAFAVTPGQ HQVLEFLVGL GIAGTGFGVI
LAMVARAASD ENRSMTLGIV TAVGSGGQII GPPLAEALLA SFPWQTVFLI FAGIVFASLV
FLPLLRAPER PSSPALEETM SQILGKALRD PSFTLIFVGF FSCGYQLGFI TAHFPAFITE
FCGPIAPGGV LHSIGVTTTS ALGALAIAVI GAANIGGTLL AAYLGKTYSK KNLLAAIYTG
RTIVATIFIL LPITPTSVIV FSAAMGSLWL ATVPLTSGLV GYIYGLRYMG TLYGIVFFSH
QLGSFMGVWL GGALFDAYGD YTAVWWVGIG VGVLSAIIHL PIKETPLGLR APTPA
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