| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0039 |
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| Symbol | |
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| ID | 3932475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 37659 |
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| End bp | 38291 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637902380 |
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| Product | hypothetical protein |
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| Protein accession | YP_507981 |
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| Protein GI | 89052530 |
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| COG category | [K] Transcription |
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| COG ID | [COG2740] Predicted nucleic-acid-binding protein implicated in transcription termination |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.745199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCGTG GTGGCCAACA TAAGGACCGA AGCGACGGGC CTACGCGCAA GTGCATTGCT
ACCGGTGAGG TCGCGCCCAA GCGCGGCTTT ATCCGGTTCG TGGTGGGGCC TGACGATCAA
GTCGTACCCG ATGTGCTTGG CCGACTGCCC GGTCGCGGTA TGTGGGTCAG CGCGGATCGT
GCGGCGTTGG AGCTTGCGGT GAAGAAGAAC CTCTTCTCCC GCGCCGCCAA GCAGCAGGTC
AGCGTGCAGG ACGACCTGGT GGATGTGGTC GAAACGCTTC TGACCCGCCG CGTGACCGAT
CTGATTGCCC TGGCCCGGAA GGGCGGCAAA GCGGTCGCGG GGTTCGAGAA GGTGAAAGAC
TGGCTGGCGA ATGCAGACGT CGGCGTGCTG CTTCAGGCCT CTGACGGGTC GGAACGTGGC
AAATCGAAAC TTTGGACCCC GGAAGGGGCC CGGTATTTTG GCATTCTGAC CGCCCAGGAA
TTGGGTTTGG CATTCGGTCG CCAAAGTGTG ATACATGGCG CGCTTGCCGC TGGTGGACTC
AGCCCTCGTG TTATAGAGGA CGCAATGAGA CTCCAGGGAC TGCGTGTAGC AGACGGTGGC
CAGACCACCG AGAAGGACAG ACGGAACGCA TGA
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| Protein sequence | MSRGGQHKDR SDGPTRKCIA TGEVAPKRGF IRFVVGPDDQ VVPDVLGRLP GRGMWVSADR
AALELAVKKN LFSRAAKQQV SVQDDLVDVV ETLLTRRVTD LIALARKGGK AVAGFEKVKD
WLANADVGVL LQASDGSERG KSKLWTPEGA RYFGILTAQE LGLAFGRQSV IHGALAAGGL
SPRVIEDAMR LQGLRVADGG QTTEKDRRNA
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