| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0028 |
|---|
| Symbol | |
|---|
| ID | 3932464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 25771 |
|---|
| End bp | 26970 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637902369 |
|---|
| Product | aromatic amino acid aminotransferase |
|---|
| Protein accession | YP_507970 |
|---|
| Protein GI | 89052519 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGCT GTCTGATGTT TGAGCATTTG TTGCCCCCTG AACCGGACAA GATCTTCCGC
CTGACAGGGC AATTCGCGGC AGATCCGCGC GCCGATAAGG TTGATCTTCT GGTTGGTCTC
TACCGTAATG CCCACGGTCT GACCCCCGTC TTGGGCGCGG TGAAAGAGGC TGAGCGCCGG
ATCCTTGAGA CGCAGACGAC CAAGTCTTAC CTCGGGTTTG AAGGCGATCG CGGTTTTATC
GCCGGGATGC GGTCCTTGCT GTTGGCAGAT GCGGTGCCTG AGGCGCGGGT CGCGGGCATT
GCCACCGTGG GCGGCACCAG TGCCTTGCGT CAGATTTTTG AACTGGTGCG CACGCTTATG
CCGGATGCAC AGGTCTGGAT CTCGGACCCG AGCTGGCCAA TTCACGCAGG TATGGCAGAA
CATCTTGGCT TGGCGCACCG CAGCTATCGC TATCTGGACC GCGACAGCAA TGGGCTGGAT
CGGGACGGCA TGATGGAGGA TCTTCGCGCC GCGCGTGCGG GTGATATCAT CGTCTTGCAT
GGCTGTTGCC ACAACCCCAG CGGTGCGGAT CTGACGCTTT CGGACTGGGA AGATGTGGCC
CGGGTCTGCC TGGCAACGGG CGCAATTCCC CTTGTCGATA TGGCGTATCA GGGCTTTGGG
ACCGGGCTGG ACGAGGATGC GGCCGGTACG CGCCTGTTGG CACAGCGTGT GCCGACGCTG
TTCGTGGCGG CCAGTTGTTC CAAGAATTTC GGCCTTTACC GCGACCGCGC CGGTGTTGCC
CTTGCGGTGA CGTCCCAGGG CGCTGCCCGC GACGCGGCGC AAGGGCATCT GATCGCGATG
AACCGCAACA ATTACTCCTT CCCGCCGGAC CATGGTGCGC GGACGGTCGA TCTGATCCTG
CACGATGCCG AACTTCGTCA GATGTGGGAG GCGGAGCTGA CGTCGATGCG TGAAACGATC
ACCCGCAATC GCCGCGCCTT GGCTGAGAGT TTGCGGGCAG AGACCGGCTC CGACAGGTTC
GGTGCGCTCG CCGCGCATCA GGGCATGTTC TCACTGATCG GAGCGACGCC TGCGCAGGTC
GATGCATTGC GAGAGGATCA TGCCGTCTAT GTGGTGGGCG ACGGGCGCAT GAATGTGGCC
GGTCTGACGG AGCAGACGGT GCCTATTGTC GCGCGGGCAA TGGCGCAGGT GCTGGGGTGA
|
|---|
| Protein sequence | MTGCLMFEHL LPPEPDKIFR LTGQFAADPR ADKVDLLVGL YRNAHGLTPV LGAVKEAERR
ILETQTTKSY LGFEGDRGFI AGMRSLLLAD AVPEARVAGI ATVGGTSALR QIFELVRTLM
PDAQVWISDP SWPIHAGMAE HLGLAHRSYR YLDRDSNGLD RDGMMEDLRA ARAGDIIVLH
GCCHNPSGAD LTLSDWEDVA RVCLATGAIP LVDMAYQGFG TGLDEDAAGT RLLAQRVPTL
FVAASCSKNF GLYRDRAGVA LAVTSQGAAR DAAQGHLIAM NRNNYSFPPD HGARTVDLIL
HDAELRQMWE AELTSMRETI TRNRRALAES LRAETGSDRF GALAAHQGMF SLIGATPAQV
DALREDHAVY VVGDGRMNVA GLTEQTVPIV ARAMAQVLG
|
|---|
| |