| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0027 |
|---|
| Symbol | |
|---|
| ID | 3932463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 25037 |
|---|
| End bp | 25663 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637902368 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_507969 |
|---|
| Protein GI | 89052518 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1738] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00697] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAA TGACTCGTCT CTTGCCTGGC GTTCTCGCCA TGGCGACCAT TGTCGTCGCC
TCGAACATCC TCGTGCAGTT CCTGTTCGGC CAGTGGCTGA CATGGGGTGC GTTCACCTAT
CCACTCGCCT TCCTTGTGAC CGACGTGATG AACCGCGTCT ATGGCGCGTC GGTCGCGCGC
AAGGTCGTGT TTTCGGGCTT CATCGTGGGC GTCATCTGCT CGCTTATTGG GACGCAGATC
ATGGGCGAGT TTGGCCCGTT GGTCACGCTG CGGATCGCGC TTGGATCAGG CATCGCCTTC
CTGACAGCGC AGCTTCTGGG CGTCGCGATT TTTGACCGCC TCCGCAACGG CGGATGGTGG
CAAGCCCCTG TAATCTCTAG CATTATCGGA TCTTCCGTCG ATACCGCTTT GTTCTTCTTT
ATCGCATTCT CGGGCACTTT GACCTCTGTT CTGCCTGGCG ATGTGGCCTG GGCCAATGAC
GTCCTCCCAA TCCTCGGCAC CGGCCCCGAG GCCCCGCTCT GGGTGTCTCT TGCTATCGCC
GATTGGGGTG TCAAACTTGC CCTCGCTTTA ATCGCTTTGA TCCCCTTCCG CCTCCTCACC
CGGAAAATAA TCGCACATCC TGCGTGA
|
|---|
| Protein sequence | MKSMTRLLPG VLAMATIVVA SNILVQFLFG QWLTWGAFTY PLAFLVTDVM NRVYGASVAR
KVVFSGFIVG VICSLIGTQI MGEFGPLVTL RIALGSGIAF LTAQLLGVAI FDRLRNGGWW
QAPVISSIIG SSVDTALFFF IAFSGTLTSV LPGDVAWAND VLPILGTGPE APLWVSLAIA
DWGVKLALAL IALIPFRLLT RKIIAHPA
|
|---|
| |