Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0020 |
Symbol | |
ID | 3932456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 19046 |
End bp | 20602 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637902361 |
Product | amino acid carrier protein |
Protein accession | YP_507962 |
Protein GI | 89052511 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1115] Na+/alanine symporter |
TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000295702 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGAAACC TATACTCCAT TCTGTTTGCA ATCGCGGCCT ATGTGGCCGT GTCCCTGCCT GCTGCGGCTC AGGAGGCAGC GGCGACACTC GACGAACGGG TCAACGCAGC CTTCGCCAAC GCCACGGGCT GGTTCGTGAA TTTCATCTTC ATGTCGATCC CCGGCACCAA CTTCCCCTGG ATCGTCATGT GGCTGGTGAT CGGCGCGACG GTTTTTACCA TCTACTTCGC TGCTGTGCAG TTTCGGTTCT TCGGCCATGC CATCGGGCTG GTGAAGGGCG ATTACTCCGA TCCCAATGAT GCGGGCGAGG TCAGCCACTT TCAGGCGCTG GCCACGGCTC TGTCGGGCAC GGTCGGCCTT GGGAACATCG CGGGCGTCGC GGTTGCCGTT GGTATCGGTG GACCGGGCGC CACGTTCTGG ATGATCCTTG CGGGTCTTCT GGGCATGGCG TCGAAGTTCA CCGAATGTAC GTTGGGCGTG AAGTACCGCA ATGAGTACCC CGATGGCACC GTGTCGGGCG GACCGATGTA CTACATCTCC AAGGGCTTCA ACGAGCTGGG CCTGCCGGGC GGCAAGATCC TCGCGGTCCT GTTTTCCATC TTCTGTATCC TCGGCGCGCT TGGCGGGGGC AACATGTTCC AGGCCAATCA GGCCCACGCA CAGATCACCC AGATCACCGG AGATTTCCCC GGCTGGATCA CCGGCCTGAT CTTCGCGGCG GTCGTCTTCG CGGTCATCGT GGGTGGCATC AAGTCCATCG CCAAAGTGAC GGAAAAGATC GTCCCGTTCA TGGGCATCCT CTACGTCGGT GCGGCGATCA TCGTGCTGGT CGTCAACTAC GACATGATCG GCTGGGCGTT TGGTCAGATC TTTGCCGGGG CCTTCACGGG TCTGGGCGTC GCGGGCGGCT TCGTCGGCGC GTTGATCCAG GGCTTCAAGC GCGCGGCCTT CTCCAACGAG GCGGGCGTTG GCTCTGCGGC GATTGCCCAC TCTGCGGTGA AAACCAAAGA ACCGATCACC GAGGGCTTCG TGTCCTTGCT GGAGCCGCTG ATTGACACCG TGGTCATCTG CACGATGACG GCGCTGGTCA TCATCATCTC TCAGCAGTTG ATCATTGATG AGGCATCGGG CCTTTACATG CTGAACGAGG CGGGAACGGC GATTGCCACA GTTGATGGCA ACGGCGGTGT TGCCCTGACA TCGGCGGCGT TTGGGTCAGC GATCAGCTGG TTCCCGTTCG TGCTGGCGAT TGCGGTGATC CTCTTCGCCT TCTCCACCAT GATCTCGTGG TCGTATTACG GGTTGAAGGC CTGGACGTAT CTGTTCGGCG AAGGCAAGAC GACGGAGCTG ATCTTCAAGC TCATCTTCTG CGCCTTCATC GTGATCGGAG CGGCGGCGTC GCTTGGGCCC GTCATCGACT TCTCGGATGC CGCGATCTTC GCGATGGCGG TGGTCAACAT CTTCTGCCTC TACTTCCTGA TGAAGGTGGT GAAGGCGGAG TTGTCCTCCT ACAGCGCGCG CCTGAAGTCC GGTGAAATCA GGAAGTTCAG CCACTAA
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Protein sequence | MRNLYSILFA IAAYVAVSLP AAAQEAAATL DERVNAAFAN ATGWFVNFIF MSIPGTNFPW IVMWLVIGAT VFTIYFAAVQ FRFFGHAIGL VKGDYSDPND AGEVSHFQAL ATALSGTVGL GNIAGVAVAV GIGGPGATFW MILAGLLGMA SKFTECTLGV KYRNEYPDGT VSGGPMYYIS KGFNELGLPG GKILAVLFSI FCILGALGGG NMFQANQAHA QITQITGDFP GWITGLIFAA VVFAVIVGGI KSIAKVTEKI VPFMGILYVG AAIIVLVVNY DMIGWAFGQI FAGAFTGLGV AGGFVGALIQ GFKRAAFSNE AGVGSAAIAH SAVKTKEPIT EGFVSLLEPL IDTVVICTMT ALVIIISQQL IIDEASGLYM LNEAGTAIAT VDGNGGVALT SAAFGSAISW FPFVLAIAVI LFAFSTMISW SYYGLKAWTY LFGEGKTTEL IFKLIFCAFI VIGAAASLGP VIDFSDAAIF AMAVVNIFCL YFLMKVVKAE LSSYSARLKS GEIRKFSH
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