| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0015 |
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| Symbol | |
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| ID | 3932451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 13929 |
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| End bp | 14792 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637902356 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_507957 |
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| Protein GI | 89052506 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACCCG TCACCATCCT GTTTCAACAA CTGCGCGAAA TTGCCCGTGC AGGTATCGAG
TTATTGCCGC AAATCGCCGT GGCCATTGTT GTCCTGCTGC TGACCTGGGC GGTCGCTGCG
GGCGTCAAGG CGGTGATCGG GAGAACACTG AAAAGGTCGA AGCTGCGCCC CAGCCTGAAA
GAACTGTTTG TCCTGTTCTC CTCCATCTTC GTTTGGGTGA TGGGGCTGAT GATCGCCGCC
GTTATCGTGT TTCCGAACCT CACCCCCTCC AGCATCCTTG CGGGTCTGGG CATTGGGTCC
GTGGCCATCG GGTTTGCGTT CAAGGATGTG TTTGAGAATT TTCTCGCCGG GATCCTGATC
CTGTCCCGTC GCAAGATGCG GATCGGGGAC CACGTGGAAT GCGAAGGGAT TGAGGGCGAA
GTGAAGAAAA TCGCCATCCG CGAAACGCAT ATCCTGCAAA CAGATGGTCA GTTGGTGATC
GTGCCGAACG CCTTGCTGTT CAAGAATCCC CTCACCATCC GCACCGATCA GGACATCCGC
CGCGTGACCG TGATTTGCGG CGTGGCTTAC GGAGAGGATG TGGACGCCGC ACGCGACGTG
ATCCACGAGG CCGTCGCCGG TTGCGATACC GTTCGCCAAT CCGACAAGCC CATCCAGATT
TTCGCGCAGG AGTTCAATTC ATCCTCGATC GATTTTGAGG TGACGTGGTG GACCGGGTCA
ACGCCATTGG ACGTGCGCCG TTCGCGCGAT CAGGTCGTGG CAGGTGTGAA ACGCGCACTT
GATGATGCCG GGATCGAGAT CCCGTTCCCG TACCGCACCC TGACGTTCAA GGAGCCGCTG
CCCATTGCAC AGCCGGAGGG TTAG
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| Protein sequence | MEPVTILFQQ LREIARAGIE LLPQIAVAIV VLLLTWAVAA GVKAVIGRTL KRSKLRPSLK
ELFVLFSSIF VWVMGLMIAA VIVFPNLTPS SILAGLGIGS VAIGFAFKDV FENFLAGILI
LSRRKMRIGD HVECEGIEGE VKKIAIRETH ILQTDGQLVI VPNALLFKNP LTIRTDQDIR
RVTVICGVAY GEDVDAARDV IHEAVAGCDT VRQSDKPIQI FAQEFNSSSI DFEVTWWTGS
TPLDVRRSRD QVVAGVKRAL DDAGIEIPFP YRTLTFKEPL PIAQPEG
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