| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0009 |
|---|
| Symbol | |
|---|
| ID | 3932445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 9144 |
|---|
| End bp | 10322 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637902350 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_507951 |
|---|
| Protein GI | 89052500 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.665186 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCCCA CATCCATCAG CCGCTTCGCG CCGTTCCTGC TGCTGCTTTT CATCGGAACG
CTCAGCAATT CCGCGATTGT GCCGTTCATG GGCTTCTACC TGATTGACGG TCTGGGGCAC
CCGCCGTGGA TGCTCAGCGT TTATTCCTTC CTTGCCATCG TGCTGACGGT TCTGGCGAAC
CGGGCCTTCG GGCGCCGGAT TGATGCGGGT GCGCCGGTGT TCCCGCTTAT CGGGGTCGCC
GCAAGCGGGT ATGCGGTTGC CTCTCTGGTC ATGGCGGTTT CACCGACCCT GCCCGTCATG
CTGACGATTG GCGTCCTGGG ATATGGCATC AGCGCTTCGG CCATTTCGAC GATGTTCAGC
CTTGGTGGTC ACATGGCCGA ACGGCATGGG GTGGAGCGCA CGCGCTTCAA CGCCATCATG
CGGGCGACCA CGTCGACGGC CTGGATGATT GGCCCCGCCA TCAGCTATGT TTCTGCCGGG
CAATTCGGGA ATGAAATCGT CTTCAAGGGC GCCGCCGTTT TGGGCCTGGC GTGGCTGGCC
TGGTGGTTTT TGACCCTGCC CCGGGATGTT CAGGCGAAAG CGCCGGAGAA ACCGCCCGCG
ACAGGCCCCG TGCCCGCCAA TACCGGCCTG TGGCTGGCAG CGGCCTTCAT CTTCGCAATG
TCCGTGGCCC ACGGCCTGAC CTTCACGGCC CTGCCGCTGT TTTTCGTGAC CGAGGTTGGC
CTGCCGGACT TTGCACCCGG CTTCGCGTTC TCGGTCAAAA CCTTTGTGGA GGTCTTTGCG
ATCTTCTCCA CCCCCTTCCT CATGGCGCGC TTCGGGCTCA GCGGGCCATT GCTGGCGACG
GCTTGCATCG CCGTGGGGGC AATCCTGTTC CTGTCGCAGG TCACGACGCT CTCGCAGATG
GTGATCGGGT CGGCGTTGGA GGGGCTCTAC TACGGGCTCT TCGCCAGCCT CGGGATCAGT
TATGTCCAGA GTTTCGCCCG CGACCGCCCG GCCCAGGCAA CGGCGATTTA TTGGAACACG
CTGATGATCA GTGGGCTTTT GTCCGGGCCT GCCGTGGGCC TGATTGCCCA GGCCACAAGC
TTCCAGACCG TCATCCAGAT CTCATCGGGC GGGGCGGCAG TGGCAGCACT CGTCCTGTTG
GTTGGGATCC TTCACGGGCG GCGGTTACAG GCGGTTTGA
|
|---|
| Protein sequence | MAPTSISRFA PFLLLLFIGT LSNSAIVPFM GFYLIDGLGH PPWMLSVYSF LAIVLTVLAN
RAFGRRIDAG APVFPLIGVA ASGYAVASLV MAVSPTLPVM LTIGVLGYGI SASAISTMFS
LGGHMAERHG VERTRFNAIM RATTSTAWMI GPAISYVSAG QFGNEIVFKG AAVLGLAWLA
WWFLTLPRDV QAKAPEKPPA TGPVPANTGL WLAAAFIFAM SVAHGLTFTA LPLFFVTEVG
LPDFAPGFAF SVKTFVEVFA IFSTPFLMAR FGLSGPLLAT ACIAVGAILF LSQVTTLSQM
VIGSALEGLY YGLFASLGIS YVQSFARDRP AQATAIYWNT LMISGLLSGP AVGLIAQATS
FQTVIQISSG GAAVAALVLL VGILHGRRLQ AV
|
|---|
| |