Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0005 |
Symbol | |
ID | 3932441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 6479 |
End bp | 7129 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637902346 |
Product | hypothetical protein |
Protein accession | YP_507947 |
Protein GI | 89052496 |
COG category | [S] Function unknown |
COG ID | [COG5587] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02453] conserved hypothetical protein TIGR02453 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.996272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.632693 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACG GGTTCGATAC CCTCATCACC CGCGCCAACG CGTTTTTCAC CGATCTGCGC GCCAATAATA CGCGCGATTT CTATGAGGCC CACAAAGCCG CCTACACGAC AGACATCAAG AAACCCGCCG AACTGCTTGC GGATTTGTTT GCCGAGGATC TCGCCAAACG CACCGGCAAG GCCCACAAAC CCAAACTGTT CCGCATCCAT CGCGATGTGC GGTTTTCCAA GGACAAGACG CCCTATAACA CGCACCTGCA TTTGATGTGG TCGCGCCCGG GACTTGGGCC GACATGGTTT TTCGGCTCTT CCTCCGATTA CCTGATACTT GGGATGGGCA TCATGGGGCT GGAGAAGGAC GGTCTCACGG CCTATCGCCA GATGGTCGAC CGGCAGGGAG ATAACCTCTC GGACGCGATC GAGGCCTCCG GGGCGCAGAT CAGCGATTGG GGGCCTGATC CGCTCAAGCG CGTGCCGAAA CCCTATGACC AAGATCATCC CCAGGCCGAG CTGCTCAGAC GCAAAGCCTT GGCGCTTTCG ACGGATCTGC CCGCAGGATG GGAGGGCGAT GGCCTTCTCA AGACTCTCAA CAAGATGATT CCCGCGCTTT TGCCCACGTG GAAAGTTCTG GATGAGACCT TTCCGGGTTA G
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Protein sequence | MSDGFDTLIT RANAFFTDLR ANNTRDFYEA HKAAYTTDIK KPAELLADLF AEDLAKRTGK AHKPKLFRIH RDVRFSKDKT PYNTHLHLMW SRPGLGPTWF FGSSSDYLIL GMGIMGLEKD GLTAYRQMVD RQGDNLSDAI EASGAQISDW GPDPLKRVPK PYDQDHPQAE LLRRKALALS TDLPAGWEGD GLLKTLNKMI PALLPTWKVL DETFPG
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