Gene Jann_4229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_4229 
Symbol 
ID3932381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007801 
Strand
Start bp14819 
End bp15145 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content52% 
IMG OID637902286 
Producthistone-like nucleoid-structuring protein H-NS 
Protein accessionYP_512169 
Protein GI89057715 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.289876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCTG GACCCATGGC AAAAACAGAT CTTGAAAAAC TATCCGTTGA AGAGCTGAAG 
AAGCTGCAAA AAGATACGGC GAAGGCGATT GCGAGTTTTG AAGACCGCAA GCGTGCTAAG
GCGATCGCAG AATTAGAGGC CGTGGCACAG AAACATGGAT TCAAGCTGGC GGATCTTGTG
GGTGGCAAGA AGGCCAAAGT TGCTTCGCCT GCCAAGTACA AGCATCCGGA GAACCCATCG
CTCACTTGGA CCGGTCGTGG TCGGCAGCCG AACTGGATTA AGGATGGGCT TGCCGCAGGG
AAGTCATTGG AAGATTTCGC GATTTAG
 
Protein sequence
MKAGPMAKTD LEKLSVEELK KLQKDTAKAI ASFEDRKRAK AIAELEAVAQ KHGFKLADLV 
GGKKAKVASP AKYKHPENPS LTWTGRGRQP NWIKDGLAAG KSLEDFAI