Gene ECH_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0838 
Symbol 
ID3927438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp856700 
End bp857917 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content28% 
IMG OID637901955 
Producthypothetical protein 
Protein accessionYP_507634 
Protein GI88657999 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0062417 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTTTTT ATCCTATTTT AAATTGGATT ATAGGGGTAT TAGTACTTAT TTGTGGGAGT 
AATTTTCAAA TAGCTTATGC TATAGTAAAT TCATATGTAG GTGAAGATTT AAATTTAAAT
GTTGCACAAA CTGCATTAGC GGCATCAATT CATATGTGGT GTTTTTCCAT TTTTCAGCTA
TTTACTGGTT CAATATTAGA TTGTTATAAT GAAAAAAAAG TACTATCAAT ATCTGTTATA
TTAACATCTA TAGGAACTTT TTTATTTGCT CATGCTGATT ATACTATTTG TTTTTTTGTA
TCGCAGATTT TTTTAGCATT AGGGGCATCT TTTGGCTTTG TAGGTGCAGG TTATATTAGT
TATAAGTTTT TTTCCCCTTT AAAGTCAGGG ATTATGTTTG GACTAGTTCA AACAGTGTAT
AGTTTATCTT CTTTATTAAT GGAATATATC TATACATATT TGACTTTGTC AGGGTTATCT
TGGAGAGATA TCATTAGGTA TATAGAATAT GCTGAAATTA TTATACTCAT TTTTACGTTG
TTTCTAAAAA ATAGTACGAA GTCAACATAT CTAGTAAAAA GTGGGAATAC AAATATCATA
AAATTATTAT TACAAGTGTT TAAACATATT GTTGAAATAC TACAGGTAAG AAACATATGG
TTATTTACGG TAGTTGGTAG TTCTATGTTT GGAGTTTTCT TATCAATAGC TATATTGTGG
GGACAAAAAT TATTAATGGC TATGAATTTG AGTGGCTATT ATGCTGGTGT TATACATTCT
GTTATATGGA TAGGTTTTGC TATAGGTTGT CCTTTAGTAA ATGCAATTTC TAATATATTG
GAAAATAGAA AACATGTGCT TATGGGTTTT TGTTTGTTAC AATGTATTAG TCTTAGTTTG
TTATTATATA GTAGTAATTT ATACTTTTTG TGTTTTTTAG TATTTATATT TGGATGTGCA
TCTGGTGGAC ATATGTTGAA TTTTTCTATT GGTACAGATG TTGTGGATAA AGATAAAGTA
GGGACTGTTT GTTCACTTAT TAATGGACTG ATGTGTATTG TAGGTGGTGT CATTATGTTT
TTAATTGGAC TTGCTTTGGA ATATCAAAAT AAATATGATA TAATACACAT AAGCTTTTTT
ATGCCAGTGC TTATTTTTCT ATCGTTTATT TTGTTATTTT TTTGTCGTGA TACTTTCTGT
AGGATTAGGG TTTTGTAA
 
Protein sequence
MCFYPILNWI IGVLVLICGS NFQIAYAIVN SYVGEDLNLN VAQTALAASI HMWCFSIFQL 
FTGSILDCYN EKKVLSISVI LTSIGTFLFA HADYTICFFV SQIFLALGAS FGFVGAGYIS
YKFFSPLKSG IMFGLVQTVY SLSSLLMEYI YTYLTLSGLS WRDIIRYIEY AEIIILIFTL
FLKNSTKSTY LVKSGNTNII KLLLQVFKHI VEILQVRNIW LFTVVGSSMF GVFLSIAILW
GQKLLMAMNL SGYYAGVIHS VIWIGFAIGC PLVNAISNIL ENRKHVLMGF CLLQCISLSL
LLYSSNLYFL CFLVFIFGCA SGGHMLNFSI GTDVVDKDKV GTVCSLINGL MCIVGGVIMF
LIGLALEYQN KYDIIHISFF MPVLIFLSFI LLFFCRDTFC RIRVL