| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0774 |
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| Symbol | rluC |
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| ID | 3927994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia chaffeensis str. Arkansas |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007799 |
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| Strand | - |
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| Start bp | 786194 |
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| End bp | 787117 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 637901892 |
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| Product | ribosomal large subunit pseudouridine synthase C |
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| Protein accession | YP_507572 |
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| Protein GI | 88658198 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATGAGTA AGTATTATAT CGTAGAGGAA GATGATCATA ATATAAGGAT AGATAAGTTT
ATTAGAAGGA TATTAAAAAT TCCCCAGTCT TTAGTTGAGA AATTTTTACG TAAAGGTGTA
GTGCTACTTG ATAATACAAA AGTGAAGTCT GATGTAAGAA TTAAAGCTGG AAATGTAATT
TGTGTAAGAT ATGATAGAGT CATTTATGAA AGGAAACAAA TTAGAAAAAT TTGTAAAGCT
GATAGTGATT TTCTAGTTCA TTTGATCCGT AATAGTGTTG TATATGAAGA TGATGACGTG
TTGATTATTA ATAAACCTGC AGGCATTTCT GTTCAAGGTG GTACTAAAGT TAAGATTAGT
ATTAGTGATA TTGTTGATAA AATTAGAGAT GGAGAATCTA TGAAAATTGT TCATAGATTA
GACAAAGATA CTAGTGGTAT TTTGATGTTA GCGCGTAATG CAAGAATATC CAGATTAATT
ATGCATGAGT TTAAAAATAG AAGGGTAGAA AAGAAATATC TGGCATTAAC CCAAGGGATT
CCAAAGAATG ATATTGGACA GATTAATCAT TCTATTATTA AAAACAAACG TAGTCTTTCT
TTAGATAAAG TTAATGATTC ATATTTACAA GAAGCTGTTA CTTCGTTTTC TGTATTGAAG
AAATTGCCTT ATGGTATTGG ATTACTTGAA TTGAAACCTA TTACTGGAAG AAAACATCAA
ATTAGAATAC ACCTTTCACA TATTGGATGT TCTATTATTG GGGATAAGAA ATACGGAAAA
TTTTGTGAAC ATGTATTAAA TGATAACTTA CAATTACATG CATATTTTTT ATCGATTAAC
ATAGGAGAAA AAAAAATAGA CTTTACTGTT CCTGTTCCAT CTTATATGAA AGATGCAATT
ATGCAGTTAG AGAAATTGTT ATAA
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| Protein sequence | MMSKYYIVEE DDHNIRIDKF IRRILKIPQS LVEKFLRKGV VLLDNTKVKS DVRIKAGNVI
CVRYDRVIYE RKQIRKICKA DSDFLVHLIR NSVVYEDDDV LIINKPAGIS VQGGTKVKIS
ISDIVDKIRD GESMKIVHRL DKDTSGILML ARNARISRLI MHEFKNRRVE KKYLALTQGI
PKNDIGQINH SIIKNKRSLS LDKVNDSYLQ EAVTSFSVLK KLPYGIGLLE LKPITGRKHQ
IRIHLSHIGC SIIGDKKYGK FCEHVLNDNL QLHAYFLSIN IGEKKIDFTV PVPSYMKDAI
MQLEKLL
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