Gene ECH_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0643 
Symbol 
ID3927999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand+ 
Start bp647514 
End bp648101 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content27% 
IMG OID637901765 
ProductRDD family protein 
Protein accessionYP_507453 
Protein GI88658203 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTAT ATAACTACTT GCCTTTCTTT AAAAAAAAGA AACAAGATCA AGATACCAAC 
AAAATTTGCT ATTCAGGAGG AATAAGAAGA TTTAGTAGTA TATTAATAGA TTTGACTATT 
TTAATATTTA TCTTACAAAT TATACACAAC GTATACTCTT ACTTTTTCAT GCATGAAACA 
GATAACACTG TAATAAAAAT TATAGAAAAA TACAAAATGA GTGTACCATT AACCGCACAA 
GAAGAACAAA TTAAAAATAA ACATGTATTT AAGGCTATTT GTGGACAAAT TATTCAGATG 
ATTGCACTTT ACATATACGC TGCATATAGT TGGACTAAAT TCTCTGCAAC ACTGGGAAAA 
TTTCTTACAG GATTAAGAGT TGTTGATGCA ACAACTTTTC AAAAAATAAC ACTATCTCAA 
TCAACAAAGC GTATTTTTGG ATCCATTCTT TCTTCTATTC CACTATGTTT AGGAATAGTA 
TGGTGTAATT TTAATAAACG TAAACAAACA TGGCATGATA AAATAGCAAA TACTGTTGTA 
GTAACCAATA AGAGTTTAAA AAATTACCAT AATAATCATA ACTTATGA
 
Protein sequence
MFLYNYLPFF KKKKQDQDTN KICYSGGIRR FSSILIDLTI LIFILQIIHN VYSYFFMHET 
DNTVIKIIEK YKMSVPLTAQ EEQIKNKHVF KAICGQIIQM IALYIYAAYS WTKFSATLGK 
FLTGLRVVDA TTFQKITLSQ STKRIFGSIL SSIPLCLGIV WCNFNKRKQT WHDKIANTVV 
VTNKSLKNYH NNHNL