| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0616 |
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| Symbol | nuoD |
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| ID | 3927439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia chaffeensis str. Arkansas |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007799 |
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| Strand | - |
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| Start bp | 621177 |
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| End bp | 622358 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637901738 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_507426 |
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| Protein GI | 88658000 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0389154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGATC GAGTCAAAAT TACACCAATG ACTTTAAATT TTGGTCCTCA ACATCCCGCA
GCTCATGGTG TAATGCGTTT GGTTTTAGAA ATGGGTGGTG AAGTTATAGA AAGGATAGAT
CCACATATTG GGTTATTGCA TAGAGGAACA GAAAAATTAA TAGAATATAA AACATATTTA
CAAGCTTTAC CATATTTTGA CCGTCTTGAT TATGTATCTC CAATGTGTCA AGAGCATGCT
TATTCTTTAT GTGTGGAGAA GTTATTAAAA TGTGAAATAC CAATTAGAGC TAAATATTTA
CGTGTTATTT TTTGTGAGTT AACTAGAATA TTGAATCATT TGTTAAATAT ATCAAGCCAA
GCGCTAGATA TAGGTGCTAT GACACCTTTA CTATGGATGT TTGAAGAAAG AGAGAAGATT
TTAGGTTTTT ATGAAAGAGC ATCAGGTGCG AGGTTTCATT CTGCTTATAT TCGTCCTGGA
GGTGTAGCAG CTGATGTTCC AGATGATTTG ATTGATGATA TATTTAAATT TATTAAAACT
TTCCCTAAGT TTATAGATGA TGTAGATGAG TTGTTAACTG AAAATAGGAT TTGGAAACAA
CGTAATGTTG ATATTGGTAT TGTATCAAAA GAACAGGCAT TAGATTGGGG TTTTTCTGGT
CCAATGTTAA GGGCTTGTGG TATTCCTTGG GATTTACGTA AAAGTCAACC TTATGAAATA
TATGAAGATT TAGAATTTGA AATTCCTATT GGAAAAAAAG GAGATTGTTA TGATCGTTAT
CTAGTAAGGA TGGCAGAGAT TAGGCAATCA ATTAAGTTGC TTGAACAATG CTTGAATCGT
CTTCCAAATG GTCCAATAAA AACAGATGAT AGAAAAATTG CTCCACCAAA AAGGTCGGAA
ATGAAAGAAT CTATGGAAGC GTTAATACAT CATTTTAAAT TATATTCAGA GGGTTATAGT
GTTCCAATAG GAGAAACTTA TATGGCTGTT GAAGCTCCAA AAGGTGAATT TGGTGTATAC
ATAGTATCTG ATGGAACAAA TAAACCATAT AGGTGTAGGA TTAGAGCTCC TGGATTTGCT
CATTTGCAAG CTATAGATAT GATGGCAAAA GGTCATATGT TAGCTGATTT AACAGCCATA
ATTGGGTCTT TAGATATAGT ATTTGGAGAA ATAGATAGGT AA
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| Protein sequence | MSDRVKITPM TLNFGPQHPA AHGVMRLVLE MGGEVIERID PHIGLLHRGT EKLIEYKTYL
QALPYFDRLD YVSPMCQEHA YSLCVEKLLK CEIPIRAKYL RVIFCELTRI LNHLLNISSQ
ALDIGAMTPL LWMFEEREKI LGFYERASGA RFHSAYIRPG GVAADVPDDL IDDIFKFIKT
FPKFIDDVDE LLTENRIWKQ RNVDIGIVSK EQALDWGFSG PMLRACGIPW DLRKSQPYEI
YEDLEFEIPI GKKGDCYDRY LVRMAEIRQS IKLLEQCLNR LPNGPIKTDD RKIAPPKRSE
MKESMEALIH HFKLYSEGYS VPIGETYMAV EAPKGEFGVY IVSDGTNKPY RCRIRAPGFA
HLQAIDMMAK GHMLADLTAI IGSLDIVFGE IDR
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