| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0540 |
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| Symbol | |
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| ID | 3927886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia chaffeensis str. Arkansas |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007799 |
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| Strand | + |
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| Start bp | 543059 |
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| End bp | 543784 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637901662 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_507353 |
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| Protein GI | 88658073 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00650711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATACAAA AGGCAAAAAA GCTGAATGTT AGGTTGTATG TGGATTGTAC TCTTAGTAAA
TCTTCTATAG TAATATTAGA TAATATTGCT TCTCACTATA TATGTCATGT AATGCGTGCT
GCGAAATTAG ATGAGGTAAA GTTATTTAAT GGCAGGGATG GAGAATGGAT AGGCGAAATA
TTTGAATTAT CTAGCAATAC TAAAATTAGA GTAAATGAGT TAATTAGAAG GCAATATGTA
CCTAAAAGTT TAACATTGTG TCTTTCTATT GTCAAAAATA CTGCATTACA GAATGTCATT
AGGCAAGCAA CAGAAATGGG AGTAACATTT ATACAGCCTA TTTATACACA ACATATAGCA
ACAAGTAATA TAAATTTATC TAAATGCAAA AAATGGGCTA TTGAAGCTGC TGAACAATGT
GGAAGGCTTG ATATACCAGA TATTTCTTTT CCTATTGATT TTATTGATTT AAAGCAGTTG
AAAACTGATG ACAACAATTT CGTGATTTGT GATGAAACAG GTAAAGGTCA TCCTCCATCA
GAGGTTTTAA AAGGTAAGAA TAACGTTCAT ATTATTATAG GGCCAGAAGG TGGTTTTTCA
AATGATGAGT TAAGCTTTGC CTATAGTTTT TGTGATGGGT TATCTTTAGG TACAACAATA
CTGAGAGTTG ATACAGCAGT TGTTAGTGCA TTAGCTTATG TAAAAGAGTA TTATGGTATG
TTGTAG
|
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| Protein sequence | MIQKAKKLNV RLYVDCTLSK SSIVILDNIA SHYICHVMRA AKLDEVKLFN GRDGEWIGEI
FELSSNTKIR VNELIRRQYV PKSLTLCLSI VKNTALQNVI RQATEMGVTF IQPIYTQHIA
TSNINLSKCK KWAIEAAEQC GRLDIPDISF PIDFIDLKQL KTDDNNFVIC DETGKGHPPS
EVLKGKNNVH IIIGPEGGFS NDELSFAYSF CDGLSLGTTI LRVDTAVVSA LAYVKEYYGM
L
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