Gene ECH_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0538 
SymbolileS 
ID3927828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp539133 
End bp542462 
Gene Length3330 bp 
Protein Length1109 aa 
Translation table11 
GC content29% 
IMG OID637901660 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_507351 
Protein GI161486748 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.882672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAC ATTACTCACA ATTAACAGGA GAACCTGATT TCCCATCAAT AGAAGAAGAG 
GTATTAAAGT TTTGGAAAGA AAATGATACT TTCAAAAAAT CTGTAGATAA CCGTGATGAA
AACAAAAGAT TTATATTTTA CGATGGACCA CCATTTGCAA ATGGATTACC TCATTACGGG
CATTTGCTAA CTGGATTCAT TAAAGATACT GTAGCTCGTT ATAAAACAAT GGCAGGATTT
AAAGTTGACA GAAGATTTGG GTGGGATTGT CACGGGTTAC CTGCTGAAAT GTTATCAGAA
AAAGAACTGG GAATATCAGG AAAGTTAGCA ATTGAAAAAT TTGGTATAGA AAAATTTAAT
AATCATTGTC GCAATTCTGT AATGAAATTT TCAAAAGAAT GGCAGCAATA TGTAGATAGG
CAAGCACGGT GGGTAGATTT TGAAAATGAT TATAAAACTA TGAATCCATC TTTTATGGAA
TCAATAATGT GGTCATTTCA TGAATTGTGG AACAAGGGAT TAATATACGA ATCTGTCAAA
ATTGTACCAT ACAGTTGGGC ATGTCAAACA CCTCTTTCAA ACTTTGAAAC TAGAATAGAC
AATGCATACA GACAAAAAAC AAGCAAAACT GTTACTGTAG CATTTGAATT ATTAGAAAAT
CCCAAGTTTC CTACAATAGA AAATGTCAAA AAATATAAAA TGCTAGTCTG GACTACTACC
CCATGGACTT TACCTTGCAA TCTTGCTCTA GCTATAAGCG CAAGCATTAA ATACTGCGGA
GCTATTATTA ATCAAGAAAT GTTTATTTTT GCTAAAGGAT ATTTAAAAAT TTTCGAAGAA
CATTGTAAAA AAAATAAAAT AGAATATCAG TTATATAATA AAGATATTTT ATCTATTAAT
TTAGAAAACT TACATTATAA ACCTCTATTT GAATACTTCG CAGATATTAA AAATGCATTT
AAAGTTCTAA CAGCAGATTT TGTAGTAGAA GGAGAAGGAA CTGGAATAGT ACATATTGCT
CCAGGATTTG GAGAAGATGA CTTTATATTA TGTCAAAAGC AAGGTATTCC AAACATTGAT
GGAGATACAT CTAGTTTACT ATCAACTATT TGCCCTATAG ACGATGGAGC AAAATTTACT
AATAAGATTT CAGACTTTGC AAACATGCAT GTATTTGATA CAAATGATGA AATTATCAGT
ATATTAAAAC AGAAAAATCT TTACTTTAAG ACAGATCAAT ATTTACACAA TTATCCACAT
TGTTGGCGCA CAGATACTCC ATTAATATAT AGAGCAATGT CATCTTGGTA CGTTAAAGTC
ACAAAAATAA AAGATAAGAT GATAGAACTT AATAAGACTG TAAACTGGAT TCCTAATTAT
ATACGCAGTG GACAATTTGG TAAGTGGCTA GAAAACGCTA AAGATTGGGC AATATCACGT
AACAGATTTT GGGGAACTCC TTTGCCAGTA TGGAAATCAG ATAACCCGAA TTATCCAAGA
ATCGATGTAT ATGGATCAGT AAAAAAAATA TTCGATAATG TCAGAGCATT AGAAGAAGAT
TTTGACATAT CATCTATAAA TGATCTACAC CGCCCATATA TTGATAATCT AGTACGTCCT
AACCCAGATG ATCCAACTGG AAAATCAATG ATGAGACGTG TTAATGATGT ATTTGATTGT
TGGTTTGAAT CTGGCTCAAT GCCTTATGCA CAACTTCATT ATCCATTTGA AAATAAAGAA
TTTTTTGAAA ACTACTTCCC AGCAGATTTT ATTACTGAAT ATATTGCTCA AACTAGGGGA
TGGTTTTATA CATTATTCAT ATTATCCACA GCATTATTTG ATAAGCCACC ATTTATAAAT
TGCATATGTC ACGGTGTAGT GTTAGATACT CAAGGACAAA AATTATCCAA AAGACTTAAC
AACTATGCTG ATCCCATGCA AATGTTCAAG CAATATGGTT CTGATGCTAT GCGATTCCTA
ATGTTATCAC ACACAGTACT ATATGGTGGA GATCTATTAC TAGATAAAGA AGGAACAATG
ATACGAGATG TACTACGTAA TGTCATAAAA CCAGTATGGA ACAGCTACAA TTTTTTTACT
ATTTATGCAA ATATAGACAA AATAAAAGCA GAAATTATTA CAGATCTCAA CGGAATAAAC
AACATAATGG ACAGATACAT AATATACGAG TGCATCAGTA CTATAAAGTC TATATTTAAT
GCTATGGAAG AGCTAGACAA ATGCTCTAAT AACTTTGGGT ATAATATAAA ACTAGCATGC
AACAATATTA CTCAGTTTTT TGAAATATTA AATAACTGGT ATATTAGAAG ATGTAGAAGT
AGATTCTGGT CATCAGAAAT CAATCAAGAC AAAATAGATG CGTATAATAT ATTATATACC
GTCATATATT TCATGATAAA AGTTTCTGCT CCATTTTTAC CTATTATTAC TGAAGCAATT
TGGCAAAAAT TAAACTTTCA AAAAGAAGAA TCTGTACATT TATCATCACT ACCAAATATG
AATAACTTCA TGTTAAGTGA TAAAGATCAA CAAAATACTC AATTTATGAA ATTAACAATA
AGCATATGTA ATTATGTGCT ATCTATCAGG AATATTCATA ATATTAGGGT CAGACAACCT
CTTAATAAAA TAGTTATATA TAGCTATAAT TGTCCAGAAT TACTCAATCT ACCTATAGAA
TACCAAAATA TTTTATTGGA AGAAATAAAT GTAAAAAGTA TATCATTTAA ATCTGATATA
TCTGATATAG CATCGTTCCA ACTAAAATTA AACTTTCCAG AACTTGGAAA AAGGATACCT
GATAAAATTA AACGTTTAAT ATTTTTATTA AAAAATAATC AATGGGAAAT ATTAGAAAAT
AATCAGTTAC TTCTTGGTAC AAAAGAAGCA GAACATTATA TAATAAATAA TAATGAATAT
ACATTAACTC TTAAAGTGCA TAATGATTTT GCATGCACTA TTAACTTAGA CCAAAATTTA
CTTGGTGTAG TGTTATTAGA TCATGAACTT TCTGATGATT TGATAATGGA AGGCATAGCA
AGGGATATAG TAAGAGTAAT ACAACACTCT AGAAAAGATA ATAAATTTAA TATCTCTGAT
AAAATAGATG TTATGATATA TACAAAAGAT AAAATAGTAC AAGACTCTAT TAAAACATGG
TCTCAATATA TAGCGCAACA AACTTTATCT ATATCACTTA TTGCATGTGA AGAGATTACA
GATGTTAAAA ATATCACAGA GTATTGTAAA ACTACAATAA AGGATAAAGA TGTATCTGTG
TTTTTAAAAA AATCAAACAC TTCAGTTTGA
 
Protein sequence
MTEHYSQLTG EPDFPSIEEE VLKFWKENDT FKKSVDNRDE NKRFIFYDGP PFANGLPHYG 
HLLTGFIKDT VARYKTMAGF KVDRRFGWDC HGLPAEMLSE KELGISGKLA IEKFGIEKFN
NHCRNSVMKF SKEWQQYVDR QARWVDFEND YKTMNPSFME SIMWSFHELW NKGLIYESVK
IVPYSWACQT PLSNFETRID NAYRQKTSKT VTVAFELLEN PKFPTIENVK KYKMLVWTTT
PWTLPCNLAL AISASIKYCG AIINQEMFIF AKGYLKIFEE HCKKNKIEYQ LYNKDILSIN
LENLHYKPLF EYFADIKNAF KVLTADFVVE GEGTGIVHIA PGFGEDDFIL CQKQGIPNID
GDTSSLLSTI CPIDDGAKFT NKISDFANMH VFDTNDEIIS ILKQKNLYFK TDQYLHNYPH
CWRTDTPLIY RAMSSWYVKV TKIKDKMIEL NKTVNWIPNY IRSGQFGKWL ENAKDWAISR
NRFWGTPLPV WKSDNPNYPR IDVYGSVKKI FDNVRALEED FDISSINDLH RPYIDNLVRP
NPDDPTGKSM MRRVNDVFDC WFESGSMPYA QLHYPFENKE FFENYFPADF ITEYIAQTRG
WFYTLFILST ALFDKPPFIN CICHGVVLDT QGQKLSKRLN NYADPMQMFK QYGSDAMRFL
MLSHTVLYGG DLLLDKEGTM IRDVLRNVIK PVWNSYNFFT IYANIDKIKA EIITDLNGIN
NIMDRYIIYE CISTIKSIFN AMEELDKCSN NFGYNIKLAC NNITQFFEIL NNWYIRRCRS
RFWSSEINQD KIDAYNILYT VIYFMIKVSA PFLPIITEAI WQKLNFQKEE SVHLSSLPNM
NNFMLSDKDQ QNTQFMKLTI SICNYVLSIR NIHNIRVRQP LNKIVIYSYN CPELLNLPIE
YQNILLEEIN VKSISFKSDI SDIASFQLKL NFPELGKRIP DKIKRLIFLL KNNQWEILEN
NQLLLGTKEA EHYIINNNEY TLTLKVHNDF ACTINLDQNL LGVVLLDHEL SDDLIMEGIA
RDIVRVIQHS RKDNKFNISD KIDVMIYTKD KIVQDSIKTW SQYIAQQTLS ISLIACEEIT
DVKNITEYCK TTIKDKDVSV FLKKSNTSV