| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0486 |
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| Symbol | |
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| ID | 3927534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia chaffeensis str. Arkansas |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007799 |
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| Strand | - |
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| Start bp | 467410 |
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| End bp | 468423 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 637901609 |
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| Product | ribosomal large subunit pseudouridine synthase A |
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| Protein accession | YP_507302 |
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| Protein GI | 88657737 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.766955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATTACAG TATATTACTT CGACATAAAT TATAATATAA AAATGCTAGA GAAAAAAATT
TTTATTAAAA GTGGAGATGA AAATAACAGA TTAGATAAAT TTATAGCAAG TAAATTAAAC
ATATCTCGTA ATCAAGTACA ACAACTAATA AAAGACAGTA AAATTCTACT TTTTGATACC
ATAATAAGGG ACAACAATCA CATAACAAAA GTAAATGACA TTTATAATAT AAGCATACCT
ATAAAAACAA TCAGTGACAC AATTACCCCT AATCACTACA TACCAATTTC AGTAGTATAT
GAAGATCATG ATATAATAAT AATAAACAAA GCCCCTGGAA TAACTGTACA TCCAGGAGCA
GGAACAAATA ATAATACACT AGTAAATGCA CTAGTTGCAC ATTACGGCAA CAGTTTAAGT
CATGTAGGAA AAGCAACAAG ACCAGGAATA ATTCACAGAT TAGATAAGGA TACTAGCGGA
CTAATGGTCA TTGCAAAAAA TGAAAAATCA TATTATTTTT TATCTGATCT ACTACTCAAA
AAACAAATAA AAAAAGAATA CTTAGCAGTA GTATGGGGGT TACCTAACCC TAAAAGTAAT
ACTATCAAAA ACTATATCTG TGTAAAACCC AATAATAAAC AAATGATGAC TGTGACGCAT
TTACCACATA AGGGTAAATT AGCAATAACT GAATATCAAA CCCAAAAAAG CTTCAGTAAC
ATAGCAAGTT TAATAAAATG TAGAATACAT ACAGGTAGAA CACATCAAAT ACGTGTACAT
ATGAGTTACA TAGGAAACTC TATAATAGGA GATCAAAAAT ACGGAAAAAA CAACAGTAAA
AGTGTAAAAT ATGCTAAACA AAGTACCATT ATCAATACAT TAAAACGACA AGCCCTTCAT
GCCTATAAAT TAGGGTTTAC TCATCCTACG AGCAACACAT ACATAGAATT TCATTCTTAC
ATTCCTAATG ATATACAAAT GCTAATTGAC GAATTAGAAC AATTAAGCCA ATAA
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| Protein sequence | MITVYYFDIN YNIKMLEKKI FIKSGDENNR LDKFIASKLN ISRNQVQQLI KDSKILLFDT
IIRDNNHITK VNDIYNISIP IKTISDTITP NHYIPISVVY EDHDIIIINK APGITVHPGA
GTNNNTLVNA LVAHYGNSLS HVGKATRPGI IHRLDKDTSG LMVIAKNEKS YYFLSDLLLK
KQIKKEYLAV VWGLPNPKSN TIKNYICVKP NNKQMMTVTH LPHKGKLAIT EYQTQKSFSN
IASLIKCRIH TGRTHQIRVH MSYIGNSIIG DQKYGKNNSK SVKYAKQSTI INTLKRQALH
AYKLGFTHPT SNTYIEFHSY IPNDIQMLID ELEQLSQ
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