| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0301 |
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| Symbol | ligA |
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| ID | 3927385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia chaffeensis str. Arkansas |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007799 |
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| Strand | - |
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| Start bp | 287917 |
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| End bp | 289947 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 637901425 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_507122 |
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| Protein GI | 88658391 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.10932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGACC AGGAAAAAGC TAAATTAGAG TTAGATAAAT TAAATAAGCA AATACAGCAC
CATGATGTTC TTTATTATGT ACAGGACAAT CCAGAAATCA GTGATGCTGA ATATGATGAG
TTATGTCGCA AAAGAAATTT AATTCTTAAC GCCTTTCCAA AACTCACACA AAGTAACGAT
TACCAAAACA ATATAGGTAG TTCTCCAGAC ACAAAGTTTG CTAAGGTTAA ACATGAAGAG
AAAATGTTTT CCTTAGATAA CGCTTTTAAT CAACAAGATG TAGAGAAATT CATCACAAGA
ACTAAAAAGT TCTTAAACAT CAATGACAAT CAATCAATAC CATTATCTTG CGAATTAAAA
ATTGATGGAC TATCATTTTC CGTCATATAT AAAAAAGGAG AAATCTATCA AGCATCCACA
AGAGGTAATG GATATTTTGG TGAAAATATT ACAACCAATG TCAAAACTAT AAAAAATCTA
CCACATATTA TTCACAATGC ACCAGATCTT CTAGAAGTCA GGGGAGAAAT ATATATAGAT
CGCTGTGATT TTATACAACT TAATAATGAT GGGAATAATT TTGCAAATCC ACGCAACGCC
GCAGCCGGAT CTGTAAGACA ACTAGATCAT AACATTACTG CCCAACGTAA ACTAAAATAT
TTTATGTATA CAATAGTCAA CACTGCATGT CTAACACAAG AAGAATTATT ATACCAATTA
AAAATCTGGG GCTTTTGTGT AAATGAACAT ACTATTACTA CAGATAATAT TGAAGAGGCT
TTTAATTTTT ACAATCAAGT TTATAACAAT AGAAGTAATA TCAACTATGA TATTGATGGT
ATAATATACA AAGTTAACGA TATCAAATCA CAACATATCT TAGGAACAAC AAGTAAATCA
CCAAGATGGG CTATAGCATA TAAGTTTCCT GCTGCAGAAG CAAAAACCCA ATTAAATAAA
ATTTCCATAC AAATTGGCAG GACTGGTGTA CTTACACCCA TTGCAGAACT TTCTCCTATA
AATATTGGTG GGGTCATAGT TACAAGAGCA AGTTTACACA ACAAAAATGA AATAGAGCGT
AAAGATATAC GTGAAGGCGA CTATGTTATT GTAAAAAGAG CAGGAGATGT AATACCTCAA
ATCGTGGATG TAGATAAAAA TTTAAGAACT CAAGAACTAA CAAAATTCGT TTTCCCAACA
ACATGTCCAT CATGTGGTAG TAGTGTATAT CAAGCAAAGC AAGAAGCATC AATATACTGT
ACTGGTGAAT TATTTTGTAA AGATCAAATC CTGGAAAAAA TAAAGCATTT TGTTTCAAAA
GACGCTTTTA ACATTATTGG ATTTGGGAAA AAACAGCTCT TATTTTTCTA TGAACAAAGA
TTAATAACAA ATATTACCGA CATATTCACA TTAGAAGAAA AAATAAGTAA TAGTGACGTA
AAATTAGAGT CATTACATGG GTGGGGTGAA AAATCCATGA GTAACCTATT TTCTGCTATA
AATAACAGTA AAGTAATCAG CTTGGAAAAT TTTATTTTTG CGTTAGGAAT AAGATTCATA
GGAAAGTACA TAGCAAAAAT ACTAGCTAAC CATTTTTCAT CATATGAAAC ATGGTATAAT
GAGATGCTCA AGTTAGCACA GAATGAAGAT TACTCGCTAA ACATACAACA GATAGGGTCC
AAAACTATTG GTTCACTCAA AATGTTTTTT AGTCAACCAC ATAATTTAAA TATGATTAAT
GATTTAGTAA AACACCTAAC AATAACAGAT ACACAGTCTA GCTCTTATCT ATCACTCATT
CATGGAAAGA TCATAGTTTT TACTGGAGAA TTATCAAGTA TGTCAAGATC TGAAGCAAAA
ATAAGGTCAG AAACTGCAGG AGCAAAAGTT TCTTCATCAT TATCAAAAAA TACAGATTTC
CTAATTGCAG GAAACAATCC AGGATCAAAA TATAAAAAAG CACAATCTCT CAATGTACAG
ATTTTAACTG AAGATTTATG GTTACAATAT ACCCAATCAA GTGAAAATTG A
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| Protein sequence | MVDQEKAKLE LDKLNKQIQH HDVLYYVQDN PEISDAEYDE LCRKRNLILN AFPKLTQSND
YQNNIGSSPD TKFAKVKHEE KMFSLDNAFN QQDVEKFITR TKKFLNINDN QSIPLSCELK
IDGLSFSVIY KKGEIYQAST RGNGYFGENI TTNVKTIKNL PHIIHNAPDL LEVRGEIYID
RCDFIQLNND GNNFANPRNA AAGSVRQLDH NITAQRKLKY FMYTIVNTAC LTQEELLYQL
KIWGFCVNEH TITTDNIEEA FNFYNQVYNN RSNINYDIDG IIYKVNDIKS QHILGTTSKS
PRWAIAYKFP AAEAKTQLNK ISIQIGRTGV LTPIAELSPI NIGGVIVTRA SLHNKNEIER
KDIREGDYVI VKRAGDVIPQ IVDVDKNLRT QELTKFVFPT TCPSCGSSVY QAKQEASIYC
TGELFCKDQI LEKIKHFVSK DAFNIIGFGK KQLLFFYEQR LITNITDIFT LEEKISNSDV
KLESLHGWGE KSMSNLFSAI NNSKVISLEN FIFALGIRFI GKYIAKILAN HFSSYETWYN
EMLKLAQNED YSLNIQQIGS KTIGSLKMFF SQPHNLNMIN DLVKHLTITD TQSSSYLSLI
HGKIIVFTGE LSSMSRSEAK IRSETAGAKV SSSLSKNTDF LIAGNNPGSK YKKAQSLNVQ
ILTEDLWLQY TQSSEN
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