Gene ECH_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0143 
Symbol 
ID3927268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp134076 
End bp134768 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content30% 
IMG OID637901267 
Productputative competence protein F 
Protein accessionYP_506971 
Protein GI88658293 
COG category[R] General function prediction only 
COG ID[COG1040] Predicted amidophosphoribosyltransferases 
TIGRFAM ID[TIGR00201] comF family protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTAGGGA AAATTTTTAA CATAATTTTT CCTAAGACAT GCGCAAATTG TGAATGTGTA 
ATTTCTTCTA ACCACGACTT ATGCAGTACA TGTAAAAGTA ATATAAATTT TTTATGTGAC
AACTATTGCA TTGCATGTGG GTGTAGTCTA CCAAATAAAG TATCAATATG TGGAAAGTGT
GTGCCTAATC CACCAAAATT TACAAAATTA GAATCTGTAT TTTCATACAA TAAGCACAGT
AAAAATATGA TTCTAAATCT GAAATTCTCT GACAATACAT TACATGTCAA AACTTATGGG
AAGTGGATGT ACAATCAGAA TCCAGATTTA TTTAACAATG TTACTACTAT AATACCCATA
CCTGTACATA AAAAAAGGTT ACGACAAAGA AAATATAATC AAGCTACTCT CCTTGCTAGG
GCCCTAAGTA AATATTGTAA TATACCTATA GAAACTTTTG TATTGGAAAG GATCGTAGAT
ACAATCCCAC AATATAATCT ATCTAGTAAA ATGAGAGAAA AGAATATTAC AAAATCTTTT
ACAGTAAAAA ATCAACATTT AATTAATAAT AAAATTATAC TACTTGTTGA TGATGTCATC
ACAACCGGAA TAACAGTCAG GACCTGTACA CATAAACTCA TTGAATCAGG CGCAAAAGAA
GTTAGAGTTA TTACATTAGC TAGAACACTA TAA
 
Protein sequence
MLGKIFNIIF PKTCANCECV ISSNHDLCST CKSNINFLCD NYCIACGCSL PNKVSICGKC 
VPNPPKFTKL ESVFSYNKHS KNMILNLKFS DNTLHVKTYG KWMYNQNPDL FNNVTTIIPI
PVHKKRLRQR KYNQATLLAR ALSKYCNIPI ETFVLERIVD TIPQYNLSSK MREKNITKSF
TVKNQHLINN KIILLVDDVI TTGITVRTCT HKLIESGAKE VRVITLARTL