Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH_0082 |
Symbol | rpe |
ID | 3928077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ehrlichia chaffeensis str. Arkansas |
Kingdom | Bacteria |
Replicon accession | NC_007799 |
Strand | + |
Start bp | 74019 |
End bp | 74705 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637901206 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_506912 |
Protein GI | 88658377 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTAACGA AAAAAAATAG TTTTAATCGA GGAAAAGTTG TAGAAGTCTC TAGTTCTATA TTGTCAGCAG ATTTTGCTAA TTTAGGTAAG TCAGTGGAAA TGTTGACAGA TGCGGGTGTA GATTATATCC ATGTGGATGT GATGGATGGT AATTTTGTGC CTAATATCAC TATAGGACCT GTTGTTGTTT CTGCAATAAA GAAATATACA ACCATCCCAT TTGATGTGCA CCTCATGATT AATTCTCCTG GTAATTATAT AGAGGCTTTT GTTGATGCAG GAGCAGATAT GATTACTATT CATGCAGAAT CCGATATACA TTTAGATCGT ATAATACAGA AGATTAAGTC TTATAAGAAA AGTGCTGGAT TATCTCTTGT TCCAACATCT CACTATAATA TTTTAGAATA TATTATTTTT GAGCTTGATC TTGTGTTGAT TATGACAGTA AATCCTGGCT TTGGCGGTCA ACAATTTATC ACATCTCAGT TAGATAAAAT TTCATGTGTT CGTAATCTAA TAGAAAAATA TTCATTGAAA ACTAAAATAG CTGTGGATGG TGGTGTTAAT ATTAAGAATG CTAAAAGTGT AATTGAAGCT GGTGCAGATA TTTTAGTTGT TGGATCTGCA ATTTTTAATG CAAATAACAT GTTAGATTAT GTACAACAAC TTAAGTCCTC TTTCTAG
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Protein sequence | MLTKKNSFNR GKVVEVSSSI LSADFANLGK SVEMLTDAGV DYIHVDVMDG NFVPNITIGP VVVSAIKKYT TIPFDVHLMI NSPGNYIEAF VDAGADMITI HAESDIHLDR IIQKIKSYKK SAGLSLVPTS HYNILEYIIF ELDLVLIMTV NPGFGGQQFI TSQLDKISCV RNLIEKYSLK TKIAVDGGVN IKNAKSVIEA GADILVVGSA IFNANNMLDY VQQLKSSF
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