Gene ECH_0073 details

Gene Information

• Locus tag: ECH_0073
• Symbol: def
• ID: 3927935
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ehrlichia chaffeensis str. Arkansas
• Kingdom: Bacteria
• Replicon accession: NC_007799
• Strand: +
• Start bp: 65137
• End bp: 65703
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 637901197
• Product: peptide deformylase
• Protein accession: YP_506903
• Protein GI: 88658603
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGTTT TGTCAATTGT TACTGTTCCT GATAAAAGAT TGTCGTTATG TTCTGAAGAA 
GTTGAAAAAG TAGATCAATC TATAAGAAAA CTAGTTGATG ATATGTTTGA AACAATGCAT 
GCTAATCAAG GGTTAGGATT GGCTGCTGTT CAGGTTGGTG TTCATAAACG TATTCTTGTT 
ATGAATGTTC CAGAAGAGTT TGAAGATTCT GAGGATATTG AGAATGTTGA GGATAAAATA 
GAAGGTTATG AACTATATGG AGGTCCTTAT TGTATAATTA ATCCTAAAAT TGTTGATATA 
TCTCAAGAGA AAGTAAAATT AAAAGAAGGC TGCTTATCTG TTCCTGGTTA TTTTGATTAT 
ATAGTACGTC CTCAGCGTAT TGCTGTTCAA TATTTAGATT ATAATGGTAA TGAATGTATA 
ATAAAAGCTC AAGGGTGGCT TGCTAGATGT TTGCAACATG AGATTGACCA TTTAAATGGA 
ACGGTATTTT TAAAATATCT ATCTAAATTT AAACGTGATT TTGCAATAGA AAAAGTGAAA 
AAGAAAGAAC GAACTGATCT TATATAA 

 

Protein sequence

MSVLSIVTVP DKRLSLCSEE VEKVDQSIRK LVDDMFETMH ANQGLGLAAV QVGVHKRILV 
MNVPEEFEDS EDIENVEDKI EGYELYGGPY CIINPKIVDI SQEKVKLKEG CLSVPGYFDY 
IVRPQRIAVQ YLDYNGNECI IKAQGWLARC LQHEIDHLNG TVFLKYLSKF KRDFAIEKVK 
KKERTDLI