| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0058 |
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| Symbol | dapD |
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| ID | 3927403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia chaffeensis str. Arkansas |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007799 |
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| Strand | + |
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| Start bp | 51551 |
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| End bp | 52390 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637901182 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_506889 |
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| Protein GI | 88657848 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAACT TTTGTAATTT TAAAGACGCT ATTGAAGATG CGTGGAATAA TTTAGCTAAT
CTTTCTAGTA ATACTTCAAT TAAAAAAGTT GTTGATGATG TTATGGATCT TTTAGATCAG
GGTAAGATCC GCATATGTGA GAAAGTAGGA GATCAATGGG TAGTTAATGA ATGGGCGAAA
AAAGCTATAT TACTGTGTTT CCGTGTGTAT GACATGAATC TTGCAGAAAT TAGCAGTGCA
GACTCAATGC TTGGTAACTT ATGTTGGTTT GATAAAGTGC AATTGAAATT TGGTAGATGG
AGTGCTGATG ATTTTAGAGC AGCAAAAGTT AGAGCTGTAC CTGGGTCAAT GGTTCGTAAG
TCTGCTTATA TTGCTCCTAA TGTAGTATTG ATGCCTAGTT TTGTAAATGT AGGTGCATAT
GTAGGTGAAG GTACTATGAT TGATACTTGG GCATCTGTCG GAAGTTGTGC TCAAATTGGT
AAGCATTGTC ATATTTCTGG TGGTGCAGGG ATAGGAGGTG TGTTAGAACC ATTAAGTTCT
AGACCTGTTG TCATAGAAGA TAATTGTTTT ATTGGTGCTC GTAGTGAAAT TGTTGAAGGT
GTAGTAGTAG GTGAAGGTTC AGTAATTGCT ATGGGTGTTT ATATTGGGGC TTCTACTAGA
ATTGTTGATA GAGCATCTGG TGAAATATCT TACGGAAAAA TTCCTCCATA TTCTGTAGTA
GTGCCTGGTT CTTATGGTAG TGGTGATTTA TCATTATATT GTGCTGTGAT TGTCAAAAAA
GTTGATGATA AAACTAGAAG TAAAGTATCT ATTAATGAAC TTTTAAGAGA TGATTCTTAA
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| Protein sequence | MENFCNFKDA IEDAWNNLAN LSSNTSIKKV VDDVMDLLDQ GKIRICEKVG DQWVVNEWAK
KAILLCFRVY DMNLAEISSA DSMLGNLCWF DKVQLKFGRW SADDFRAAKV RAVPGSMVRK
SAYIAPNVVL MPSFVNVGAY VGEGTMIDTW ASVGSCAQIG KHCHISGGAG IGGVLEPLSS
RPVVIEDNCF IGARSEIVEG VVVGEGSVIA MGVYIGASTR IVDRASGEIS YGKIPPYSVV
VPGSYGSGDL SLYCAVIVKK VDDKTRSKVS INELLRDDS
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