Gene NSE_0964 details

Gene Information

• Locus tag: NSE_0964
• Symbol: dcd
• ID: 3931900
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Neorickettsia sennetsu str. Miyayama
• Kingdom: Bacteria
• Replicon accession: NC_007798
• Strand: -
• Start bp: 850940
• End bp: 851497
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637901118
• Product: deoxycytidine triphosphate deaminase
• Protein accession: YP_506828
• Protein GI: 88608088
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0717] Deoxycytidine deaminase
• TIGRFAM ID: [TIGR02274] deoxycytidine triphosphate deaminase

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGTAA TGCCTGATCA ATGGATAAAG TCCAAGGCTT TAGAATCTAG GATGATAGAG 
CCGTTTGTGT CGTCCAAAAT CTCTACTGGT GTTATTTCTT ATGGGCTTTC CTCATACGGA 
TACGATGCGA GAGTATCAAA TAAATTCAAG ATTTTTACGA ATCTTGCAGT TTCGCAGGTC 
GATCCAAAAA ACTTTGACGA ATCAATGCTC ATAGAGAGGA CAGGAGATTT CTGTATTATT 
CCACCGAACA GCTTTGCACT AGGGTGTACG ATCGAATATT TTAGAGTTCC TCGTGGTGTC 
ATAGTCATCT GTTTGGGGAA GTCTACATAT GCTAGGTGCG GAATAATAGT AAATGTAACG 
CCCCTTGAGC CTGAATGGGA AGGTCATGTT ACCCTTGAGT TTTCCAACAC TACACCATTA 
CCGGCAAAGA TTTACTCAAA CGAGGGTGTG TGTCAGATGA TTTTTCTAAA GGGTAGCACT 
AATTGTGATG TTTCATATAA AGATGCAAAA GGCAAATATA TGGGTCAAGC TGGCATTACG 
CTTCCTATAG TAAAATAA 

 

Protein sequence

MPVMPDQWIK SKALESRMIE PFVSSKISTG VISYGLSSYG YDARVSNKFK IFTNLAVSQV 
DPKNFDESML IERTGDFCII PPNSFALGCT IEYFRVPRGV IVICLGKSTY ARCGIIVNVT 
PLEPEWEGHV TLEFSNTTPL PAKIYSNEGV CQMIFLKGST NCDVSYKDAK GKYMGQAGIT 
LPIVK