| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0741 |
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| Symbol | virB10 |
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| ID | 3932221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 661528 |
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| End bp | 662901 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637900897 |
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| Product | type IV secretion system protein VirB10 |
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| Protein accession | YP_506617 |
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| Protein GI | 88608478 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.177823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGGAA ATAAGGAAAA CAACGATTTG GAAGAGTTTA GTATAGGTGA TGAGTCTGTA
GAGGTTAGTG ACAGAGGTTC CGGGATACAA GGTGGGAGCA TTAAAAAGAA GCTCATCTAT
ATTTTAATTG TTGTAGTTGG GTTTTTTTTT GCATATAAGT TTTTTTCCAG CGAGTCACAG
AAGGAAGATA CACATATTCC AGCGAGAGAA ACTCAGGTTG AAGAGAGGGT CGTTTCCGAT
AAGATAAAAA CCGATACGAA GGAAGGTTTT CTCGTCCCAA AGGATGATGC GGCGCTTGTG
CTTCTTCCGC CAAAGATATC TGATCTTCCA AAGTTACCTG CAATACCTGT TCCTGCTATA
CCAGAGAAGC CTCCTGTTGT TCCAACTAAG CCCGGGGCTG GGCCGTCTCT TCCGTCATTT
TTTCCTCAGC CACCTGGCTC TGCATCCAGC GCTATGGATC CACCTGGTAA GGTGAGTAGT
GGCATAAATA AATACAATAG AAGCACCCCT ATGATTGCCT TTGGAGGAGG GGGAGTCACC
TCCTCGGAAG GACAGTCCAG TGGGATTAGT ATTTCCGATC CGGCTTCTCT TCTTGATCCG
AGTAAGTTAG GTGAGTTGAG GAGGTCGCTT CAACAGAGAG ATACGACTGC TCCTGAAGAT
AAGGAATTGA CGAGGACGCC TGGGCAGATA GTTGCTGGGT ATGTTGGGGA TTTGGATTAT
GTACTCACAG AGGGCAAAAT GTTGGATGCT GTTCTCGAGA CAGCTGTAAA CACCGATCTA
AAAGCGAAAG TGCGTGCGGT CGTGAGTAGG GATGTCTTTT CTGAATCGGG TAACCAGATT
TTAATTCCTA AGGGCTCAAG ACTAATAGGA TCATACTCAA CAGACATTTC CTTTACGCAA
TCTAGAGTTG ATATAACGTG GTCGCGCATT ATTCTCCCTA ACGGAATAGA TATAAATCTA
GGTGGCTTTG ATGGTGTGGA TTCGCTTGGT AGAGCTGGGG TTAGAGGAGC TGTGAATAAC
AAAGTTTCTA ATGTTATGAG CACATCTATC CTCCTTGCTA CAGCTAGAGT AGCAAGTGGT
ATGATAGTGG ATAAGATAAT GGGAACGAAT AAAAGTCAGA TGAACGTTCC CAAAAACAGG
CCGTCGCTGA AGGATGAAAA TGCTGATGAA TCGAAGGTGA AAGGTTCTCC GGGTGCGATT
ATTGCCATGC AAGCTATTCA AGATGCCTCA AAGCAGGTAA CGGATTATGT CAAGCGCACG
GCCGACGTGA ACCCAACGCT TACTGTGAAC CAGGGTACAA GGCTTAAGGT ATTCGTAAAT
CAAGACGTGG TTTTTCCAAG AGCCGCGTTT CAAGAGTATA AGGTGCTTAA CTGA
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| Protein sequence | MRGNKENNDL EEFSIGDESV EVSDRGSGIQ GGSIKKKLIY ILIVVVGFFF AYKFFSSESQ
KEDTHIPARE TQVEERVVSD KIKTDTKEGF LVPKDDAALV LLPPKISDLP KLPAIPVPAI
PEKPPVVPTK PGAGPSLPSF FPQPPGSASS AMDPPGKVSS GINKYNRSTP MIAFGGGGVT
SSEGQSSGIS ISDPASLLDP SKLGELRRSL QQRDTTAPED KELTRTPGQI VAGYVGDLDY
VLTEGKMLDA VLETAVNTDL KAKVRAVVSR DVFSESGNQI LIPKGSRLIG SYSTDISFTQ
SRVDITWSRI ILPNGIDINL GGFDGVDSLG RAGVRGAVNN KVSNVMSTSI LLATARVASG
MIVDKIMGTN KSQMNVPKNR PSLKDENADE SKVKGSPGAI IAMQAIQDAS KQVTDYVKRT
ADVNPTLTVN QGTRLKVFVN QDVVFPRAAF QEYKVLN
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