Gene NSE_0624 details

Gene Information

• Locus tag: NSE_0624
• Symbol: petA
• ID: 3931477
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Neorickettsia sennetsu str. Miyayama
• Kingdom: Bacteria
• Replicon accession: NC_007798
• Strand: +
• Start bp: 546044
• End bp: 546565
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637900780
• Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit
• Protein accession: YP_506503
• Protein GI: 88608022
• COG category: [C] Energy production and conversion
• COG ID: [COG0723] Rieske Fe-S protein
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence; [TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.28707
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTAGATA AAAAAAGAAG AGATTTCATA GTTACAACTA CGGTTGCCTT CGGTGCTGGT 
GGTGCTGTTG CTGCTACCTG GCCCTTGTTG AAGTCGTTTG GTCCCTCTGC GGATGTACTC 
GCGACAGCTA CAAGAGAAGT GGATATAAGC AATGTGAAGC CTGGTCAGGG TGTTAAGGTT 
TTATGGCAGG GAAAACCCGT CTACATAAGA AACAGGACAG AAGAAGAGAT AAGGATGGCG 
CGGAACGCTG ATCTTACCTC TCTTAAGGAT CCTGAACGCG ACGCTGCGCG TGTAAAACCG 
AACAAGGAGA ACTGGCTTGT GGTGGTCGGT GTATGTACGC ACCTTGGGTG TGTGCCCCTT 
AGTAATACTG ATGGTACTTT CTTCTGTCCT TGCCACGGGT CGCACTATGA TACTTCCGGC 
AGGGTTGTTT CCGGTCCAGC GCCGACTAAT CTTGTTGTGC CGGATTATTA TTTCATCAAC 
GATACAACAG TTGTGGTAGG AGCAAAGGAA AAAAATGTCT GA 

 

Protein sequence

MVDKKRRDFI VTTTVAFGAG GAVAATWPLL KSFGPSADVL ATATREVDIS NVKPGQGVKV 
LWQGKPVYIR NRTEEEIRMA RNADLTSLKD PERDAARVKP NKENWLVVVG VCTHLGCVPL 
SNTDGTFFCP CHGSHYDTSG RVVSGPAPTN LVVPDYYFIN DTTVVVGAKE KNV