Gene NSE_0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0535 
SymboldnaJ 
ID3932277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp460669 
End bp461808 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content41% 
IMG OID637900691 
Productchaperone protein DnaJ 
Protein accessionYP_506418 
Protein GI88608567 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID[TIGR02349] chaperone protein DnaJ 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGGAA AGAAAAAAGA TTACTACGAA ATACTCGGCG TGAGTAGAAG TGCCTCCACC 
GAAGAAATAA GGAAGGCTTA TAAGAAGCTT GCACTTCAAT ACCACCCAGA TCGTAATAAG
GGTGATAAGG AGGCAGCGGA AAAATTTAAA GAAATTGGTG AAGCATACAG TGTCTTAAGT
AATCCTGAAA AAAAGGCATC CTATGACCAA TATGGACACT CGGCATTCAA CGGAGGCGGT
TTTGGAGGTG CAGGTGGTTT CTCTGCAGAC TTCTCTGGTA TGGACTTCTC AGATATTTTC
AACGATCTTT TCGGAGGGGG AAGGACGCGC AGAACAAAAG CTGACTTCAA TGAAGTCATC
AAGGAAGACG GCTCAGATTT GCGATATGAT GTATCAATCA CTCTAAGAGA AGCATTTGAA
GGTAAGGAAG TAAAAATTTC CTATACAAAA CTAGCAGAAT GTGAGCAGTG TGGTAATACA
GGATGTGAGG GAAAAATCAA GCCGGTGCAA TGCAGTACGT GTAATGGTGC GGGATCAATC
AGGTCACAAC AGGGCTTTTT TACTGTAGAA AGAAGCTGCA GTACCTGCAA CGGGAGTGGA
ATGATCATTG AAAATCCATG CAAAAAATGT GGAGGCACAG GACGAATCAG GAAAGGTGTA
ACCACTTGTG CAAAAATACC ACGCGGAATA AGTGACGGTG CAAAAGTATT ACTTAGAGGT
CAAGGGGAAG CGGGCTCTAG AGGAGGTAAG CCGGGTGACT TATATATGAT TGTCCATATT
AAACAGGACG AATTTTTCAC ACGTAAAAAC AATGATCTTT ATTGCGAAGT CCCAATAAGG
ATGTCTTTGG CAGCCCTGGG TGGAGAAATA GAAGTTCCAT CATTAGAAGG TAAAAAGTTC
AAGATCAAAC TCCCAGAAGG GTCTCAAACA GGTGATAAAC TTAAACTCAA AGGAAAAGGT
ATGTATCTCC TTAACTCTGA GTATAGGGGC GATATGTATG TTCGACTCAC TATAGAGACA
CCGGTAAAAC TTACGAAAAA ACAGAGAGAA ATATTAGAAG AATTTGAGAA AGAATCGCTT
GGGTGCAGCC CAAAATCTGA GAAATTTTTT AGCAAAATTC GCTCTATGTT TGGTCTCTAA
 
Protein sequence
MPGKKKDYYE ILGVSRSAST EEIRKAYKKL ALQYHPDRNK GDKEAAEKFK EIGEAYSVLS 
NPEKKASYDQ YGHSAFNGGG FGGAGGFSAD FSGMDFSDIF NDLFGGGRTR RTKADFNEVI
KEDGSDLRYD VSITLREAFE GKEVKISYTK LAECEQCGNT GCEGKIKPVQ CSTCNGAGSI
RSQQGFFTVE RSCSTCNGSG MIIENPCKKC GGTGRIRKGV TTCAKIPRGI SDGAKVLLRG
QGEAGSRGGK PGDLYMIVHI KQDEFFTRKN NDLYCEVPIR MSLAALGGEI EVPSLEGKKF
KIKLPEGSQT GDKLKLKGKG MYLLNSEYRG DMYVRLTIET PVKLTKKQRE ILEEFEKESL
GCSPKSEKFF SKIRSMFGL