| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0466 |
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| Symbol | |
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| ID | 3931776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 381860 |
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| End bp | 382969 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637900622 |
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| Product | HK97 family phage major capsid protein |
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| Protein accession | YP_506351 |
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| Protein GI | 88608773 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACACAA GAGTAAATAA TTTACTTCTA AACCTCGAAA CAGAAATTAA ATCTTTTAAA
GAGAAAGAAG ACGAAAGATT ACAGAGTTGT GAGAGAAGAT TAAAAAAACT AGAAGATGGC
TATGACTTGG CTGTGAAACG ACCTTTTACT TCGACCGAAA TAAGCGAAGA TTGTCATTAT
AAGAAGCAAC TCAATAGTTA TCTTAAGAAG GGATCAGCAA ATTCCATTGA AATCAAGAGT
AATGGCTTTC CACTAACAGA TACCTTAATT AACTCAATCC ATGAGCAAAT GAAGAAGCTC
TCCCCAATAA GGAAGCTAGC ATCTGTTAAT ACGATCTCAA CAGACTGTAT AACTTACATA
AGCAATGGTG ACGCGTTAGA GGCACAATGG GTTTCTGAGG ATGAGATAAC TAATAGCGAT
GCAAAAGAGC ACATAATCAC AACAGAAATA AATACCTATG AGCTCTACAC ACAACCAAAG
ACCACTCAAA AAGTCCTTGA TGATCCATCT ATAAACGTAG AAAAATGGTT AATTGAACAG
GCTGCTTTGG CATTTACACA ACTCGAAAAC GAAACCTTCA TTACTGGTGA TGGAAAAAAT
AAACCACACG GAATACTTCA ACATAATACA GATTCCACAG GAAAACAGAT TTGTAAGATC
ACAAGCAAGG AGAAAGACAA AATAACCCCT GCTGATATTT TAAGCCTCTA TTATGGATTA
CAAAGAGAGT TCTCTGTTAA TGGAACATTT CTTATGCACA GTACAACTAT CCAGCTAATA
AGAGGGCTAA AATATGAACA GACAGGACAC TATATGTTTC AGCCAGGAAT TTTAGTAGGT
CAACCCGACA CGTTAATGGG AATACCTGTT ATTGAGTGCT CAGAAATGCC TATAATACCA
ATATCTGATA AATCTACGAG TTCAACAAAG AAATATCCAA TCATTTTTGG AGATTTTAAG
CGTGGATATC AAATCGTCGA TAGAAGCGAA ATGCGGGTTC TAAGAGATCC ATACTCTGCA
AAACCTTATG TTTCTTTCTA TATTACCAAA AGGGTTGGCG CAAAGGTAAT TAATCCAAAG
GCTTTTGTTT TTTTGGAAAT GAAATCCTAA
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| Protein sequence | MDTRVNNLLL NLETEIKSFK EKEDERLQSC ERRLKKLEDG YDLAVKRPFT STEISEDCHY
KKQLNSYLKK GSANSIEIKS NGFPLTDTLI NSIHEQMKKL SPIRKLASVN TISTDCITYI
SNGDALEAQW VSEDEITNSD AKEHIITTEI NTYELYTQPK TTQKVLDDPS INVEKWLIEQ
AALAFTQLEN ETFITGDGKN KPHGILQHNT DSTGKQICKI TSKEKDKITP ADILSLYYGL
QREFSVNGTF LMHSTTIQLI RGLKYEQTGH YMFQPGILVG QPDTLMGIPV IECSEMPIIP
ISDKSTSSTK KYPIIFGDFK RGYQIVDRSE MRVLRDPYSA KPYVSFYITK RVGAKVINPK
AFVFLEMKS
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