| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0366 |
|---|
| Symbol | |
|---|
| ID | 3931443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | + |
|---|
| Start bp | 297885 |
|---|
| End bp | 300113 |
|---|
| Gene Length | 2229 bp |
|---|
| Protein Length | 742 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637900522 |
|---|
| Product | sensor histidine kinase/response regulator |
|---|
| Protein accession | YP_506255 |
|---|
| Protein GI | 88608143 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGTA GATACACAGA TGGTATCAAA AAGAACAAGC TGAACTTTGT TATCAGGTAT
CCGAGAAGAT TTTTCTTAGT TTTCATTTTG ATGTTACTGC AGTTTCTGTG CGGTGCTCCA
ATTGTTTTGG GATTCAATTC AATAGATCTG TCAGGCGTTC ACGAAATTAA AGGGCTTTTC
TATGCATGCG GGATTATTAT ATTTTTTCTC CTCACTTACA ACTTAAAGAA ACTTCACTTA
GTACTTGCAG CAGCGGAATT TCAAAATATG TTCTACTCAA ATGCTGCAAA GGCACTGACC
GAATTTTACT TGATCATCAC CAATAATGGC GAGGTAGTAT ATAGGGATGA GAGAACGAAG
ATAAAAAATC TACAATCCCT TTTAGGAGAG AAATACGAAA AGTTTATTTC TGATATCAGG
GAAGGGGTGC TGTATCACAG TTTTTCTTAT GATGGACAGG TGGTAGAAAT TACCCCAATG
ATTCGTCCAA AGGGGTATTT CATTGTTGCG GCCAGGAGGG TTGGTGAAAG AGAAATTTAT
GATGTGCTTT TACGAGAGGC GGGGATTTCT TTGTATAGCG TCAGAGGTGA TTCATTAAAG
TACAGATGTG CTTCCTATTT CGAAGAGGCG AGTTATAAAA AAACTTTTCT TGAGAATGAG
CTTTACAGAC TAACAGAGGT TTTTTTAACA GAGCAAAACC ATAAAGGCCT CTTCCTGCAA
AACTACAGAA GGTGTTTCAA TGACACACAT TACGGAGTGT TAGTACCAAA GTTGAAAGAA
ATCAGAGAGC TAGCAAACAA TGCGTCTATC GGTATTGTTT TAATGAGCAA TGACTTAGAA
ATAATTAGCG CGAATGACGC TTTCTTTGAT ATATTCGAGA AGGGAGATCA GATAAAGCAG
TTTCTTCGTG ACAAATTGAG TGATTTAAAG CGTGGAGGTG GACCGTCTAT ATTTAATTTT
TCCACGGAGA ACGGTGATAG TGCACGACTT TACCTTTCAA CTTGTGGTAT TCTTAATATA
GGGTTTCTCG TCGACCTAAG CGAGTTAAGT GACTTGCAGA AAAAATTTCA GCATTCTCAA
AAGATATTTT CTTTAGGTGA GTTGAGTGGT GGTATAGCTC ACGACTTTAA TAACATTCTC
ACTGCGATAA TGGGCTTTGC AGAAATGCTG CTTGAAGATG TGCGACTAGA AAGCAAGCAC
TACTATAACG TTGCTCAGAT AAGGTATAGC GCAAAAAAAG GTAGGGACTT GGTAAAGAAA
ATTTTGGCTT TTTCTCGAAA ACAAACTCTG CATCCCGAGG TTTTGAGTAT GGCAGAGGTT
GTGAAAAGTA TGAGGCAGTT TATAGAGAGG CTCGTTCCAG AAAATATTAA GCTGACTTTT
GTTATTAGGT CAGGTCTAAA AAACGTAAGA GTCGACAGGA CAGAGATAGA GCAGAGTCTT
ATCAATTTAA TAGTCAATGC ACGTGATGCA ATAGAAACGT GTGGGGAAAT CACTGTTGAA
ATTGCAGAAA CTTTCATAAA CAAAAAATAT GCTGTTCTTC CTGGTACTCA AAATGAGGAG
GTTGTTTTAA AAGGAGAGTA CATAAGCCTT ACAGTTCGTG ATAACGGTTG TGGAATAAAC
AAGGAGTTGC TGTCGAAAAT TTTTGATCCT TTCTTTTCAA CAAAAAGTGT AGATAAAGGA
ACAGGTTTAG GCCTTTCTAC TGTTTATGGC ATAATGAAGC AGATGAAGGG TTACATAAAT
GTTGAGAGCA CCGAAGGCCA GGGTTCCCTT TTTACACTAT TGATCCCAGT TTCCTATGAA
GATATCAGTA GTGATGCAAA AAAGGTTGAT GAAGATTTGG TTCCTTCAGA GAGAAGCAAA
GGTGCAAAGA TACTGCTAGT TGAAGATGAA AAAATTGTCA GAAATTTTTT GGTGAAAGCT
TTAACTCGCC AGGGTTTTAG TGTCATCGAG TACGAAAGTA GTAAGTCAGC TCTTGAAAAA
TTTGAAGAAG AAAAAAATAC GGTTGCCCTC CTAATTACAG ATGTCGTAAT GCCCGGTATG
GATGGTCCGG AAATGGTCAA GGAGATGAGA AAGCAGAAAG CGGATCTCAA AGTTCTTTTC
ATGTCTGGGT ACACGCGTGA CAAGTTACAT TTAGACAGTA AAAATCGTGA TGAAATTTTT
GTAGCGAAGC CTTTTGGGAT TAATGAGTTA ATTTCTAAAA TCATAAGCTT AACCGAAGGT
GGGGGTTAG
|
|---|
| Protein sequence | MKSRYTDGIK KNKLNFVIRY PRRFFLVFIL MLLQFLCGAP IVLGFNSIDL SGVHEIKGLF
YACGIIIFFL LTYNLKKLHL VLAAAEFQNM FYSNAAKALT EFYLIITNNG EVVYRDERTK
IKNLQSLLGE KYEKFISDIR EGVLYHSFSY DGQVVEITPM IRPKGYFIVA ARRVGEREIY
DVLLREAGIS LYSVRGDSLK YRCASYFEEA SYKKTFLENE LYRLTEVFLT EQNHKGLFLQ
NYRRCFNDTH YGVLVPKLKE IRELANNASI GIVLMSNDLE IISANDAFFD IFEKGDQIKQ
FLRDKLSDLK RGGGPSIFNF STENGDSARL YLSTCGILNI GFLVDLSELS DLQKKFQHSQ
KIFSLGELSG GIAHDFNNIL TAIMGFAEML LEDVRLESKH YYNVAQIRYS AKKGRDLVKK
ILAFSRKQTL HPEVLSMAEV VKSMRQFIER LVPENIKLTF VIRSGLKNVR VDRTEIEQSL
INLIVNARDA IETCGEITVE IAETFINKKY AVLPGTQNEE VVLKGEYISL TVRDNGCGIN
KELLSKIFDP FFSTKSVDKG TGLGLSTVYG IMKQMKGYIN VESTEGQGSL FTLLIPVSYE
DISSDAKKVD EDLVPSERSK GAKILLVEDE KIVRNFLVKA LTRQGFSVIE YESSKSALEK
FEEEKNTVAL LITDVVMPGM DGPEMVKEMR KQKADLKVLF MSGYTRDKLH LDSKNRDEIF
VAKPFGINEL ISKIISLTEG GG
|
|---|
| |