| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0335 |
|---|
| Symbol | mutS |
|---|
| ID | 3931998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | + |
|---|
| Start bp | 273806 |
|---|
| End bp | 276253 |
|---|
| Gene Length | 2448 bp |
|---|
| Protein Length | 815 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637900491 |
|---|
| Product | DNA mismatch repair protein MutS |
|---|
| Protein accession | YP_506224 |
|---|
| Protein GI | 88608613 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
|---|
| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.213975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAG AATTCCCGCC TGCGATGAAA CGGTATTTGG AAGTCCGATG CCAATACCCA
GATGCGGTTG TTTTCTATAG AGTAGGTGAT TTCTACGAGA TGTTTTTCGA AGATGCACGC
GAGGTATCGC ATCTACTAGG GTTGCATCTT ACTCGAAGGG GTACGTACAA GGGGAAAGAT
ATTCCGATGT GTGGGGTACC AGTTTCTTCT TGTGAAGTTT ACATAAACAA ATTAGTAAAG
CTAGGTCGTA AGGTTGCTAT TTGTGAGCAA TTGGAAACAG CAGAGGAAGC AAAAAAACGT
GGTGCCACAG CTATAGTCAG AAGAGATGTA GTTCGGCTGG TTACTCCTGG GACACTTACT
GAGGATAATC TTCTAGTGAG TGGGGAGAAC AACTATTTAC TCTGTGTTGC TCCTGGGAAG
AATGAGATTG GTCTGGCATG GTTGGATATT TCTACAAAGA AGATTGTCTT CACAAGTGCC
AACCCAGCTT CTTTGGAAAG CTATCTCGCG AAAATTGAGC CCAAGGAGGT ATTACTTCCA
GATGCAATTG ATTCAGAACT GAGAAAAGTT ATAGAACAAC ACAACATCCA TATAACGAGA
CGTCCCAATA ACCTTTTTCA ATTTGATTAT GCCGCAAATG AATTGAGAGG GTTTTATAAT
GTTCTTCAAT TGGGTTTTAT GGATGCTAGA TCTCCATGCG AAATTGTTGC TTGTGGTGCT
CTGATTGCTT ATGCGCGTGC AACACAAATG GGGGAGCTAA AACGGTTAGA ATTTCCAAAA
CGATACGAGA AGGGCTACTA TCTTGCGCTT GATGCATCAA CTATTCGAGG TCTGGAGTTA
ATCGAATCGC AAACACCAGG TGAGAAGAAT AGTTTACTGC AAGTAATTGA CCAGACGTGT
ACAGCAGGAG GTAAAAGGCT TCTAAAGAGC TATATCGTTT CTCCGCTGAT ATCGGTCGAA
GAAATTCAAG CCCGTCAAGA CAAGGTAGAA TTTTTCTTTA TACAAGAAGA GTTGCGAAAA
AAGGTGCGTA CCGAACTTGC TAACATTCCA GATGCAGAGC GAGCACTGTC GCGCATTGCA
CTGAATCGTG GAGAACCAAT TGATTGTCTT GCTGTGCATT CCTGTATGAG GAGTTCGCTA
TTACTCGCTG AGTGTTTTTC TGCTTTCCTA GAGAATGGTT ATATTAGAAG CATATATGAC
AAATGTGCTC CAGATGATGA ATTGATGGAG ACTTTGCGCA CTGCGTTTTT ACCAACTTCT
AATAGAAAAG TGGATGGCCC GTTTCTAGAT CCTACACATC ATCCCAAACT TCTAGAGTTG
AATAGGTTAT CCACCAACGC TGATGTGGTG ATAAATGATT TGTTAAACAC ATACAAAAGG
AATACTGGGA TTAACTCTTT GAAATTGGGT AAGAACAACC TTATAGGCTA CTATGTTGAG
GTTCCTAAGT CCGCGCCGCT TCTTGATAGT GAAGTTTTTA TCCACAGACA ATCCTTGTTG
AACAATATAC GCTATACAAC TCTTGAGTTG CAGAATTTGG AGGCACAGAT AGCAAAAGCA
AACGAGAACT ACAGAAAGTT AGAATTGGAA CTTTTCAGGG AACTGTGTGG AAAAATTCTT
GCATCTGAGG GTCCACTGAA AGAAATGATC GCAGCAATAG CAGAACTGGA TGTTATAGCT
TCCTTTGCTG AGATTGCTGT TCAAAGAAAA TATGTGCGTC CACAGGTTGA TAATAGTAAC
GAACTGCGCA TTTCTGGGGG TAGACACCCA TTTGTAGAAC AGGTGAATGC ATTTGTGCCA
AATGATCTAG CTTTTACCTC CGCAGAGCGT GTGTGTGTTT TAACTGGGCC TAATATGGCT
GGAAAAAGTA CTTACCTGCG TCAAAATGCA TTGATAACTA TACTTGCTCA AATGGGTTCG
TTTGTGCCAG CTGATTCTGC TCACATCGGT GTTGTAGATA GGGTTTTTAG TCGCATTGGC
GCATCTGATA ATATTGCCAT GGGCAAGTCA ACGTTTATGG TGGAAATGAT GGAGACAGCA
AATATAGTTA ATAATGCGAC ATGCAGATCT CTCGTAATCT TAGATGAGGT TGGGAGAGGT
ACGTCTACTC TAGACGGTAT CTCAATCGCA CAAGCTGTTC TTGAATATTT GCATGACTCA
GTGAACTGTA AGACTATTTT TGCAACTCAT TACAACGAGC TTTGTGATCT GGAAAGTAAA
CTCCCACGGA TGAAATGTTA CTCAATTGAA GTAAAGCGCT GGCGAGATGA GGTTCTTCTA
ATGTATAAAA TTGTTCCTGG GCGAGGTGAT AATTCGTATG GAATACATAC AGCAATGCTT
TCTGGTATTC CAGAAGCGAT TATCCGTCGC GCAACCGAAA TAGCGAAGGA AAAGAATCTC
AGCATTGAGA ATTCCCTTTC TAATGAAAGG ATCAGAGTGA AACACTAG
|
|---|
| Protein sequence | MSEEFPPAMK RYLEVRCQYP DAVVFYRVGD FYEMFFEDAR EVSHLLGLHL TRRGTYKGKD
IPMCGVPVSS CEVYINKLVK LGRKVAICEQ LETAEEAKKR GATAIVRRDV VRLVTPGTLT
EDNLLVSGEN NYLLCVAPGK NEIGLAWLDI STKKIVFTSA NPASLESYLA KIEPKEVLLP
DAIDSELRKV IEQHNIHITR RPNNLFQFDY AANELRGFYN VLQLGFMDAR SPCEIVACGA
LIAYARATQM GELKRLEFPK RYEKGYYLAL DASTIRGLEL IESQTPGEKN SLLQVIDQTC
TAGGKRLLKS YIVSPLISVE EIQARQDKVE FFFIQEELRK KVRTELANIP DAERALSRIA
LNRGEPIDCL AVHSCMRSSL LLAECFSAFL ENGYIRSIYD KCAPDDELME TLRTAFLPTS
NRKVDGPFLD PTHHPKLLEL NRLSTNADVV INDLLNTYKR NTGINSLKLG KNNLIGYYVE
VPKSAPLLDS EVFIHRQSLL NNIRYTTLEL QNLEAQIAKA NENYRKLELE LFRELCGKIL
ASEGPLKEMI AAIAELDVIA SFAEIAVQRK YVRPQVDNSN ELRISGGRHP FVEQVNAFVP
NDLAFTSAER VCVLTGPNMA GKSTYLRQNA LITILAQMGS FVPADSAHIG VVDRVFSRIG
ASDNIAMGKS TFMVEMMETA NIVNNATCRS LVILDEVGRG TSTLDGISIA QAVLEYLHDS
VNCKTIFATH YNELCDLESK LPRMKCYSIE VKRWRDEVLL MYKIVPGRGD NSYGIHTAML
SGIPEAIIRR ATEIAKEKNL SIENSLSNER IRVKH
|
|---|
| |