Gene NSE_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0308 
SymbolgshA 
ID3931398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp251072 
End bp252247 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content39% 
IMG OID637900464 
Productglutamate--cysteine ligase 
Protein accessionYP_506198 
Protein GI88608518 
COG category 
COG ID 
TIGRFAM ID[TIGR02049] glutamate--cysteine ligase, T. ferrooxidans family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGAC ATTTCTCAAA GATTTCTACG AATATAGGAG AAATCCGTCG GTGGTGCCAC 
AGCAGAATTA GTGGAAAGTT GTTGTACCTC TCGGCAGACA TAAGGAACGC TAGATTTAAA
CTTGCCCCGG TAGATGTAAA CATCTTTCCA GCTGGATTCC ACTTACTCAA TAAGGAAAAC
CAGACACTCG CAACAAGGTT GATTAGTGAA CGCTATACAG GAAAGACAAT TTTACTAATC
ATAGAGACAC ATACCAGAAA TACTCACTAT TTAAGCAACG TTCACACACT GAAAAAATTA
TTTGAAGATG CAAAAAATAC CGTTATTCTA GGAAATCCTA GCGACCAGAA AATAGAAAAT
ATAAATACAG AAACTTTTCA TATAAAGGAT AAAAGAATCA TCACGGAAAG TGGCACGACT
CCGGATTTAA TAGTACTAAA CAACGACATG ATCTCACTCG ACCCTTCTGT CCTCCTAGAA
GTAACCCAAC CGTGCCTCCC TTCCCCATTA CTAGGTTGGT GGAAAAGGAC AAAAACTCAG
TATTTCCCAT ACTATGAAAA AACGGTAGAG GAATTCTCCA ATACTTTTGA GTTAGATCCG
TGGTTATTCT ATGCTTATTC AGAAGCTTGT GACAATATTA ACTTTGACAC TCAAGAAAGT
CTCGCAAGGC TTGCAGATGT TGTAGATGGA ATAATTCAAA AGATCCAGAA AAACTACAAG
CAGTATGGAA TATCGTCAAA ACCGTTTGTT TTTATCAAAG CAAACAGCGG TAGTTATGGT
ATGGGGATCC TCACTGCAAG CAGTGGAAAA GAAATTCTCT CTATGAACAG AAAAGAGCGT
AAAAAATTAG GAACCACTAA AGGTAATACT GCAATTACAA GTGTTATAGT CCAGGAAGGC
ATAGAAACGG AAGAATATTA TCTAAACTAC CCTGCAGAGA CCCTTATGTA CTCGGTTCTA
GGGAAAAAAA TTGCATTCGC AACACGCTAT AATACGAAAC ATGATGCGCG ACAAAACCTA
AACAGCTCTG GAATGCATTT TTCTGGCCAC ACGCCTATGA AAGCAAGTCA AGTGCAACTA
GAAATTGTAA GTGATCTTAT CATTATCGCA GCAGAAAAGG AGGCCCAATC CATAGACGAT
AAAAACGTCG CCGCACTACC GCATCAAGCT GGTTAA
 
Protein sequence
MDRHFSKIST NIGEIRRWCH SRISGKLLYL SADIRNARFK LAPVDVNIFP AGFHLLNKEN 
QTLATRLISE RYTGKTILLI IETHTRNTHY LSNVHTLKKL FEDAKNTVIL GNPSDQKIEN
INTETFHIKD KRIITESGTT PDLIVLNNDM ISLDPSVLLE VTQPCLPSPL LGWWKRTKTQ
YFPYYEKTVE EFSNTFELDP WLFYAYSEAC DNINFDTQES LARLADVVDG IIQKIQKNYK
QYGISSKPFV FIKANSGSYG MGILTASSGK EILSMNRKER KKLGTTKGNT AITSVIVQEG
IETEEYYLNY PAETLMYSVL GKKIAFATRY NTKHDARQNL NSSGMHFSGH TPMKASQVQL
EIVSDLIIIA AEKEAQSIDD KNVAALPHQA G